Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02207 ATGGCTGCGCGATCCCTATTGACCCGAAAAACCCTAGCCACAGTGCTCCGCCGTGACTCCACGGCACTGGGCGCACAAGCAGCAGCACATTCGCGCGGACTTCACACTTTCACGCTGCCGGATCTGAATTACGACTACGGCGCACTGGAGCCGGCTATAAGCGGGGAGATCATGGAGATTCACCACAAGAAGCACCATCAGACTTACGTCACTAATTACAACAAGGCCCTCGAGCAGCTTCACGATGCTCTCCCTAAGGGCGATGCTTCTACCATCGTTAAGCTCCAGAGTGCCATCAAGTTCAACGGCGGAGGTCATATCAACCACTCTATTTTCTGGAAGAATCTAGCTCCGCAACGGGAAGGAGGCGGCGAGCCACCCAAGGGTTCGCTGGGATGGGCCATTGACGAGCATTTTGGCTCTTTCGAAAAATTGGTACAGAAGGTGAACGCAGAGGGTGCTGCCTTACAAGGGTCTGGATGGGTGTGGCTCGGTCTAGACAAGGAGTTTAAGAAGCTTGTAGTTGAAACCACTGCCAATCAGGACCCACTGATTACAAAGGGACCAGGATTGGTTCCATTGCTTGGCATAGACGTTTGGGAGCATGCATATTACTTACAGTACAAGAATGTCAGACCAGACTATCTGAACAACATTTGGAAAGTTATTAACTGGAAATATGCCAGCGAAGTGTATGAAAAAGAGAGCTCTTAA 714 0.507 MAARSLLTRKTLATVLRRDSTALGAQAAAHSRGLHTFTLPDLNYDYGALEPAISGEIMEIHHKKHHQTYVTNYNKALEQLHDALPKGDASTIVKLQSAIKFNGGGHINHSIFWKNLAPQREGGGEPPKGSLGWAIDEHFGSFEKLVQKVNAEGAALQGSGWVWLGLDKEFKKLVVETTANQDPLITKGPGLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVINWKYASEVYEKESS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02207 237 PANTHER SUPEROXIDE DISMUTASE 1 235 - -
Aip10g02207 237 Pfam Iron/manganese superoxide dismutases, C-terminal domain 127 229 IPR019832 GO:0004784|GO:0006801|GO:0046872
Aip10g02207 237 Gene3D Fe,Mn superoxide dismutase (SOD) domain 54 117 IPR036324 -
Aip10g02207 237 PANTHER SUPEROXIDE DISMUTASE 2 1 235 - -
Aip10g02207 237 SUPERFAMILY Fe,Mn superoxide dismutase (SOD), C-terminal domain 122 234 IPR036314 -
Aip10g02207 237 PIRSF MnSOD_FeSOD 8 237 IPR001189 GO:0004784|GO:0006801|GO:0046872
Aip10g02207 237 ProSitePatterns Manganese and iron superoxide dismutases signature. 198 205 IPR019833 GO:0004784|GO:0006801|GO:0046872
Aip10g02207 237 SUPERFAMILY Fe,Mn superoxide dismutase (SOD), N-terminal domain 34 118 IPR036324 -
Aip10g02207 237 Pfam Iron/manganese superoxide dismutases, alpha-hairpin domain 36 117 IPR019831 GO:0004784|GO:0006801|GO:0046872
Aip10g02207 237 PRINTS Manganese superoxide dismutase signature 40 51 IPR001189 GO:0004784|GO:0006801|GO:0046872
Aip10g02207 237 PRINTS Manganese superoxide dismutase signature 61 74 IPR001189 GO:0004784|GO:0006801|GO:0046872
Aip10g02207 237 PRINTS Manganese superoxide dismutase signature 100 113 IPR001189 GO:0004784|GO:0006801|GO:0046872
Aip10g02207 237 PRINTS Manganese superoxide dismutase signature 156 164 IPR001189 GO:0004784|GO:0006801|GO:0046872
Aip10g02207 237 PRINTS Manganese superoxide dismutase signature 196 208 IPR001189 GO:0004784|GO:0006801|GO:0046872
Aip10g02207 237 Gene3D - 118 237 IPR036314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02207 Aip-Chr10 98823534 98826305 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02207 K04564 - gmx:100101896 428.713