Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01961 ATGGCCAGCTCCATTTCACACTCTCGCCAATCTCATCTCTCTCTCATCCACTTCACTCTCCTCCTTCTCCTCTTCACACCCTTTTCCCTCTCCACAACTATAACCCAAGAGCAGGAACAGAAACAAGATGAAGCAGATACCTCAATCACCCGCTTCCAACGCTACCTCCGAATCAACACCGCTCACCCCAACCCATCCTACTCCTCCGCCGTCTCCTACCTCATCTCCCAAGCCGACTCCCTCGCCCTCCGCTACCAAACCCTCTACTTCTCCCCAAACAAGCCCCTCCTCCTTCTCACATGGCAAGGCACCGACCCTTCCCTCCCTTCCATCCTCCTCAACTCCCACCTCGACTCCGTCCCCGCCGAGCCCTCCAAATGGCAGCATCCTCCCTTCTCCGCGTTCCGCCGCTCCCACGACGGCGCCATCTTCGCCCGAGGTGCCCAGGATGACAAGTGCATCGCTATGCAGTACCTCGAGGCCATCCGCAACCTCAAGGCCCGCGGATTCACCCCCTCAAGATCCGTCCACGTGTCACTCGTCCCCGACGAAGAGATTGGAGGCGCCGACGGGGCTGCGAAGTTCGTCGAATCGAAGGAGTTCGCGGAGTTGAAGGTTGGATTTGCGCTCGACGAAGGGCAGGCGTCTCCTGGGGATGAGTACAGGGTGTTCTATGCCGATAGATCGCCGTGGGGGCTGAAGATTAAGGCGAGGGGGCAACCCGGACACGGGGCCTGGATGTATGATGGGAGCGCCATGGAGAATTTGATGAAGAGCGTTGAGGTTATCAACAGGTTTAGGGAGAGCCAGTTCGATGTTGTTAAGACTGGGAAAGCTTTGAATTCGGAAGTTGTTTCGGTTAATCCTGTTTATCTCAAGGCTGGGGTTCAATCAGAATCTGGGTTTGTGATGAATGTGCAACCTTCAGAAGCAGAGGCGGGTTTTGATCTCAGGTTGACCCCTACAACGGACCCTGATGAAATGAGGAGGAGAATCGCATCTGAATGGGCACCAGTTATTAGAAATATGTCGTATGAGGTAATACCTATCTGA 1053 0.5508 MASSISHSRQSHLSLIHFTLLLLLFTPFSLSTTITQEQEQKQDEADTSITRFQRYLRINTAHPNPSYSSAVSYLISQADSLALRYQTLYFSPNKPLLLLTWQGTDPSLPSILLNSHLDSVPAEPSKWQHPPFSAFRRSHDGAIFARGAQDDKCIAMQYLEAIRNLKARGFTPSRSVHVSLVPDEEIGGADGAAKFVESKEFAELKVGFALDEGQASPGDEYRVFYADRSPWGLKIKARGQPGHGAWMYDGSAMENLMKSVEVINRFRESQFDVVKTGKALNSEVVSVNPVYLKAGVQSESGFVMNVQPSEAEAGFDLRLTPTTDPDEMRRRIASEWAPVIRNMSYEVIPI 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01961 350 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 148 187 IPR001261 -
Aip10g01961 350 PANTHER PUTATIVE-RELATED 36 348 - -
Aip10g01961 350 PIRSF ACY-1 38 348 - -
Aip10g01961 350 TIGRFAM Ac-peptdase-euk: N-acyl-L-amino-acid amidohydrolase 42 347 IPR010159 GO:0004046|GO:0005737|GO:0006520
Aip10g01961 350 Pfam Peptidase family M20/M25/M40 112 210 IPR002933 GO:0016787
Aip10g01961 350 Pfam Peptidase dimerisation domain 228 334 IPR011650 -
Aip10g01961 350 SUPERFAMILY Zn-dependent exopeptidases 46 290 - -
Aip10g01961 350 Gene3D Zn peptidases 38 231 - -
Aip10g01961 350 SUPERFAMILY Bacterial exopeptidase dimerisation domain 232 344 IPR036264 -
Aip10g01961 350 PANTHER AMINOACYLASE-1 36 348 - -
Aip10g01961 350 Gene3D - 232 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01961 Aip-Chr10 71529100 71531556 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01961 K14677 - gmx:100817383 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01961 10 71529100 71531556 Aip10g01961 10 71529100 71531556 ECH