Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01899 ATGGCTTCCTTCACCCTCAGACTCACCCCTTCTTCTGCCTCTTCCATTAACAAACCTATACTCGCTTCTTTTTCTTCCCACCTTAACCCACAACGCGCCTCATTCCCTTTCTCAAACAACCACAACTCCCTAAACCTTCAAACCCTGCATCATCATCATCATCATCATCATCATCACCATCATCATCTTTTCCCCGCGATTCGCCCTTTCCTTCAACAAACCAGAGCAGCTACACCAGTAACAAAAGACCTATGGGAAAATTTGATTCTGAACAGTGAAACCCCAGTCCTTGTTGAATTCTATGCAAATTGGTGTGGCCCGTGCAAGATGGTACACCGTGTGATGGATGAGATCGAAATTGAGTATGCTGGGAAACTCAAGTGCTTCAAGGTGAACACAGACACTGATATGGAAATTGCTGATGACTACGAAATTAAGGCTGTACCAGTGGTTCTGCTGTTTAAAAATGGCGAGAAATGTGATTCTGTAATTGGCACTATGCCAAAGGAGTTTTATGTGGCTGCCATTGAGAGGGTGCTCAAGTCTTAA 549 0.4426 MASFTLRLTPSSASSINKPILASFSSHLNPQRASFPFSNNHNSLNLQTLHHHHHHHHHHHHHLFPAIRPFLQQTRAATPVTKDLWENLILNSETPVLVEFYANWCGPCKMVHRVMDEIEIEYAGKLKCFKVNTDTDMEIADDYEIKAVPVVLLFKNGEKCDSVIGTMPKEFYVAAIERVLKS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01899 182 Gene3D Glutaredoxin 77 182 - -
Aip10g01899 182 Pfam Thioredoxin 79 176 IPR013766 -
Aip10g01899 182 PANTHER GEO12009P1 25 181 - -
Aip10g01899 182 TIGRFAM thioredoxin: thioredoxin 82 178 IPR005746 GO:0015035
Aip10g01899 182 PRINTS Thioredoxin family signature 96 104 - -
Aip10g01899 182 PRINTS Thioredoxin family signature 104 113 - -
Aip10g01899 182 PRINTS Thioredoxin family signature 144 155 - -
Aip10g01899 182 ProSiteProfiles Thioredoxin domain profile. 61 182 IPR013766 -
Aip10g01899 182 CDD TRX_family 85 177 - -
Aip10g01899 182 SUPERFAMILY Thioredoxin-like 70 180 IPR036249 -
Aip10g01899 182 ProSitePatterns Thioredoxin family active site. 97 115 IPR017937 -
Aip10g01899 182 PANTHER THIOREDOXIN M3, CHLOROPLASTIC 25 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01899 Aip-Chr10 60813744 60817081 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01899 K03671 - gmx:100306680 211.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01899 10 60813744 60817081 Aip10g01899 10 60813744 60817081 ECH