Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01890 ATGAAGAAGCCAACTCCGGCAACAACAATTGTAGCTATTATTTTCCTTCTTCTTCATTCCTCGCTCGCTCTCAAGGAAGCGCAAACATGCGTGGCAAACAGAAACTGCGACTCAGGTTTACATTGCGAAACGTGTGTGGCAAACGGGAACTTGCGACCACGGTGCACTCGAACCCAACCAACTAACCCGACTTCAAAGGTGAAGGGGTTGCCGTTCAACCATTATTCATGGCTCACGACTCATAACTCATTTGCGATGTTGGGTCAGAAATCGGCCACTGGCGCTCTCATTCTCTCTCCGACCAATCAGCAAGATACCATCACCGATCAGCTTCATAATGGAGTACGAGGGTTGATGCTTGACCTGTATGACTTCCAGAGTGATATTTGGTTATGTCACTCGTTTGGTGGCAAATGCTACAACTACACAGCTTTTCAACCTGCGATCAATGTTCTCAAGGAGATTCAAGTATTTCTTGAGGCAAACCCATCAGAGATTGTTACTATCATAATTGAGGATTATGTTACTTCACCAAAAGGCCTAACAAAGGTTTTTGATGCTGCTGGACTCAAAAAGTACTGGTTTCCGGTGTCTAGAATGCCCAAAAATGGTGGAGACTGGCCAACCGTTGATGATATGGTGAGCAAGAATCAGCGTTTAATCGTCTTCACCTCAAAATCCGCTAAGGAAGCTTCTGAAGGGATAGCCTACGAGTGGCGATATTTGGTCGAAAACCAATATGGAGATGGTGGAATGAAGGCTGGTATGTGCCCGAATCGCGCAGAATCGCCGGCGATGAACACGACATCAAGATCGCTAGTACTAGTGAACTTCTTCCGTGACCTTCCGGATGTTACCAAATCCTGCAAGGACAATTCTGCTCCTTTGCTAAACATGATCAACACTTGCTATGAAGCATCCGGGAAACGATGGCCTAATTTTATTGCTGTTGATTTCTACAAGAGAAGTGATGGAGGAGGAGCTCCACAAGTAGTAGATGTTGCTAATGGAAATCTAGTATGTGGTTGTGGAAACATAGCCACCTGCAAGCCAAACATGACATTTGGAGTGTGCGAGTTACCTGAGGCTGATGTAGCTCCTCCCCGTGCAGCCGTGGGGGTAGAACCACCACCACCACCTCCTCACACGAGCTCTGCCTGTAATAATTGCAAGCCAATTGCTTTGTTGTGGTTGTTTGCCATGACTACTCTTCTTGTTTCCTTCCTTTTCTCATTGTGA 1239 0.4617 MKKPTPATTIVAIIFLLLHSSLALKEAQTCVANRNCDSGLHCETCVANGNLRPRCTRTQPTNPTSKVKGLPFNHYSWLTTHNSFAMLGQKSATGALILSPTNQQDTITDQLHNGVRGLMLDLYDFQSDIWLCHSFGGKCYNYTAFQPAINVLKEIQVFLEANPSEIVTIIIEDYVTSPKGLTKVFDAAGLKKYWFPVSRMPKNGGDWPTVDDMVSKNQRLIVFTSKSAKEASEGIAYEWRYLVENQYGDGGMKAGMCPNRAESPAMNTTSRSLVLVNFFRDLPDVTKSCKDNSAPLLNMINTCYEASGKRWPNFIAVDFYKRSDGGGAPQVVDVANGNLVCGCGNIATCKPNMTFGVCELPEADVAPPRAAVGVEPPPPPPHTSSACNNCKPIALLWLFAMTTLLVSFLFSL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01890 412 SUPERFAMILY PLC-like phosphodiesterases 68 340 IPR017946 GO:0006629|GO:0008081
Aip10g01890 412 CDD PI-PLCc_At5g67130_like 61 336 - -
Aip10g01890 412 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 71 179 - -
Aip10g01890 412 Gene3D Phosphatidylinositol (PI) phosphodiesterase 61 332 IPR017946 GO:0006629|GO:0008081
Aip10g01890 412 PANTHER PLC-LIKE PHOSPHODIESTERASES SUPERFAMILY PROTEIN 9 378 - -
Aip10g01890 412 PANTHER UNCHARACTERIZED 9 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01890 Aip-Chr10 58809978 58817478 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01890 - - gmx:100819253 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01890 10 58809978 58817478 Aip10g01890 10 58809978 58817478 ECH
Aip10g01890 10 58809978 58817478 Aip05g00631 05 7839106 7842844 ECH