Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01877 ATGGAGATCGCGCACGAGCCACCGCCTTCTCTCGACGGCAGCCCTATCGCCGCCGAAACTGTTGCAAACTCTCCGCCGTCGTCGTCTTCCTCTTCCTCCCCTTCGTCTTCTGCCTCCTCTCTGGCTTCGTCACCTCGTGCCGCAAAAGGAAAGGAGATAGAATCAACCGCATCGTCGGCAGCGCCGGCGCCGGCAGCTTCGCCTACTGCTAGGTACGAAGACGATGACGAGGAGGAAGAGGACGTGTGCCGGATATGCAGGAACCCTGGCGATGCCGAGAACCCTCTCCGGTATCCTTGTGCGTGCAGCGGGAGTATCAAGTTTGTGCATCAGGATTGTCTCCTTCAGTGGTTGAATCACAGCAACGCTCGCCAATGCGAGGTCTGCAAGCATGCATTCTCGTTTTCTCCTGTTTATGCTGAGAATGCCCCAGCTAGGTTACCGTTTCAAGAATTTGTGGTTGGAATGGCAATGAAAGCTTGCCACGTTCTGCAATTCTTCTTGCGCCTGAGCTTTGTGCTATCCGTGTGGCTCCTAATTATACCTTTCATAACATTCTGGATATGGCGATTAGCTTTTGTAAGAAGTTTCAGTGAAGCCCAGAGGCTATTCCTAAGTCATTTATCAACAGCAGTTATTCTGACTGATTGCCTCCATGGTTTCCTGCTTTCTGCAAGCATTGTCTTCATATTTCTTGGGGCCACTTCTCTGAGAGATTACTTTAGGCATTTGCGAGAAATTGGGGGACAGGATGCTGATAGAGAAGATGAAGTGGACAGAAATGGGGCGCGAATTGCTAGAAGAGCTCCTGGACAAGCTAATCGTAATATTAATGGTGATGGGAATGGTGAAGATGCTGGTGGAGCACAAGGAATTGCAGGAGCTGGACAAGTGATTAGAAGAAATGCTGAAAATGTTGCTGCACGGTGGGAGATGCAAGCAGCACGTCTTGAGGCCCATGTTGAGCAGATGTTTGATGGTCTGGATGATGCTGATGGAGCAGAGGATGTGCCCTTTGATGAACTTGTTGGCATGCAGGGTCCAGTTTTTCATTTGGTTGAGAATGCATTTACTGTGCTTGCAAGCAATATGATTTTCCTTGGTGTTGTAATCTTTGTGCCCTTCTCATTGGGTCGCATCATACTCCATTATCTATCTTGGTTCTTCTCAACTGCTAGTGGTCCTAATTTGTCATCTGAGACTCAAGAAAGTGGATCAATTGGTCAGGTTGCAGACATGCTGAAAGTGAATGCTAGTGGATTGAGTGAAATGGCAAACAACATAAGTGAATCTGCCTCGTCTGATCTCTTGAAAGGAGTGTCAATTGGAACTTCAAGGCTTTCAGATGTTACTACTTTAGCAATAGGATATATATTCATATTGAGTCTAATTTTCTGCTACTTCGGTATTGTTGCTTTGATTCGTTACACGAAGGGTGAGCCTTTGATGATGGGAAGATTCTATGGTATTGCTTCTATAGCAGAAACAATTCCATCTCTCTTCAGGCAGTTTTTGGCAGCAATGAAGCACTTGATGACTATGGTTAAGGTTGCTTTCCTTTTGGTTATTGAACTTGGGGTATTCCCCTTGATGTGTGGATGGTGGCTTGATGTTTGCACCATACAGATGTTTGGGAAGACAATGGTTCACAGAGTTCAGTTCTTCTCTGCATCACCTTTAGCCAGTTCCCTAGTTCATTGGGTTGTGGGGATTGTGTATATGCTACAAATTAGCATATTTGTCAGCCTTCTTAGAGGGGTTTTGCGCAATGGGGTTCTGTACTTCCTTCGGGATCCAGCTGATCCAAACTACAATCCGTTCCGTGATCTGATTGATGATCCTGTCCACAAGCATGCTCGCAGGGTTCTGTTATCTGTTGCAGTTTATGGCAGTTTGATTGTGATGCTAGTATTTTTGCCTGTTAAACTTGCCATGCGGATGGCTCCTTCTATTTTCCCACTTGACATATCGGTTTCTGATCCATTCACTGAAATCCCAGCGGACATGCTTCTCTTTCAGATTTGTATCCCATTTGCTATTGAGCATTTTAAATTGCGGACAACTATTAAATCCCTGCTTCGATACTGGTTCACAGCAGTTGGTTGGGCACTTGGTTTAACTGATTTCTTACTGCCTAGACCTGATGACAATGGTGGTCAAGAAAATGGAAATGGGGAACCAGTTAGGCAGGACAGGCTACAGGTTGTACAAGCAGGGGTGCACGATCAGGGTATGGTGGCCTTTGCGGGGGATGATTTGAATAGGGTTATTAATGCAGCAGGTGATCCAAATGCTGCCGAGGATTATGATAATGATGAACAATCTGATTCTGACAGTTATGCTTTTGCACTTCGCATTGTTCTACTACTGGTGATAGCTTGGATGACCCTGCTTGTCTTCAACTCTGCCCTGATAGTTGTACCAATTTCACTTGGACGGGCACTTTTCAATTCTATTCCACGTCTGCCCATAACTCATGGCATTAAGTGCAATGATCTGTATGCATTCGTAATTGGAAGCTACGTGATCTGGACTGCTGTTGCTGGAGTTAGATACTCAATTGAGCAAATCAAAAAAAGGAGGGCCTCAGTCTTGTTTGGCCAAATATGGAAGTGGTGTGCCATTGTTATGAAGAGTTCTGCACTTTTGTCTATATGGATATTTGTCATCCCGGTGCTAATTGGGCTTCTCTTTGAGCTTTTGGTCATCGTGCCAATGAGAGTTCCAGTGGACGAAAGTCCTGTGTTCCTCCTCTATCAAGACTGGGCTTTAGGCCTTATATTCCTAAAGATATGGACAAGATTGGTTATGTTAGACCACATGATGCCTCTCGTGGATGACAGCTGGCGAGTAAAGTTTGAGAGAGTGAGAGAAGATGGTTTCTCCAGGCTACAAGGCCTTTGGGTCCTTCGGGAAATTGTACTTCCAATCATAATGAAACTATTGACAGCATTGTGTGTACCTTATGTTCTTGCCAGAGGTGTGTTTCCGGTACTTGGGTATCCTTTGGTGGTCAATTCTGCTGTATATCGGTTTGCATGGTTGGGATGCCTCTGTTTCAGTTTCTTGTGCTTTTGTGCCAAGAGATTTCATGTTTGGTTTACGAATCTTCATAATTCAATACGCGATGACCGGTATCTCATTGGCCGGCGGTTGCACAACTTTGGAGAACATGTCGAGAAGGCAAATGAAGCAGGAGCTTCTACAGGCGTGCCGGATACAATTTTATCTGACCATGAAGCAGATGTTGGACTTAGGCTGAGGCGCATAAATCAACAGGCAGGCTGA 3288 0.4553 MEIAHEPPPSLDGSPIAAETVANSPPSSSSSSSPSSSASSLASSPRAAKGKEIESTASSAAPAPAASPTARYEDDDEEEEDVCRICRNPGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYAENAPARLPFQEFVVGMAMKACHVLQFFLRLSFVLSVWLLIIPFITFWIWRLAFVRSFSEAQRLFLSHLSTAVILTDCLHGFLLSASIVFIFLGATSLRDYFRHLREIGGQDADREDEVDRNGARIARRAPGQANRNINGDGNGEDAGGAQGIAGAGQVIRRNAENVAARWEMQAARLEAHVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVIFVPFSLGRIILHYLSWFFSTASGPNLSSETQESGSIGQVADMLKVNASGLSEMANNISESASSDLLKGVSIGTSRLSDVTTLAIGYIFILSLIFCYFGIVALIRYTKGEPLMMGRFYGIASIAETIPSLFRQFLAAMKHLMTMVKVAFLLVIELGVFPLMCGWWLDVCTIQMFGKTMVHRVQFFSASPLASSLVHWVVGIVYMLQISIFVSLLRGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAMRMAPSIFPLDISVSDPFTEIPADMLLFQICIPFAIEHFKLRTTIKSLLRYWFTAVGWALGLTDFLLPRPDDNGGQENGNGEPVRQDRLQVVQAGVHDQGMVAFAGDDLNRVINAAGDPNAAEDYDNDEQSDSDSYAFALRIVLLLVIAWMTLLVFNSALIVVPISLGRALFNSIPRLPITHGIKCNDLYAFVIGSYVIWTAVAGVRYSIEQIKKRRASVLFGQIWKWCAIVMKSSALLSIWIFVIPVLIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDDSWRVKFERVREDGFSRLQGLWVLREIVLPIIMKLLTALCVPYVLARGVFPVLGYPLVVNSAVYRFAWLGCLCFSFLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEHVEKANEAGASTGVPDTILSDHEADVGLRLRRINQQAG 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01877 1095 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 141 IPR013083 -
Aip10g01877 1095 MobiDBLite consensus disorder prediction 253 286 - -
Aip10g01877 1095 SMART ringv_2 82 130 IPR011016 GO:0008270
Aip10g01877 1095 Pfam RING-variant domain 83 129 IPR011016 GO:0008270
Aip10g01877 1095 MobiDBLite consensus disorder prediction 20 44 - -
Aip10g01877 1095 CDD RING_CH-C4HC3_MARCH6 82 131 - -
Aip10g01877 1095 PANTHER ZINC FINGER, RING-CH-TYPE, ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 71 1045 - -
Aip10g01877 1095 SUPERFAMILY RING/U-box 77 133 - -
Aip10g01877 1095 ProSiteProfiles Zinc finger RING-CH-type profile. 75 136 IPR011016 GO:0008270
Aip10g01877 1095 MobiDBLite consensus disorder prediction 1 78 - -
Aip10g01877 1095 ProSiteProfiles Zinc finger RING-type profile. 83 130 IPR001841 -
Aip10g01877 1095 PANTHER SSM4 PROTEIN 71 1045 - -
Aip10g01877 1095 Coils Coil 300 320 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01877 K10661 - gmx:100811171 1913.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01877 10 55424133 55430052 Aip10g01877 10 55424133 55430052 ECH