Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01860 ATGGGTAGGGAATCTTCTTCCCTGCACATATTCTTCTTCCCTTTCCTGTCTCATGGCCACATGATCCCAATGGTTGATATGGCCAAACTCTTCGCTTCAAGAGGGGTTAAGTCCACCATAGTCACCACCCCAGTAAACGCCTCTCTCATCTCCAAAGCCATAGGCAAGTCCAAAACTCACAACAACAACAATATCCACATAGAAACCATCGAGTTTCCATGTTCTAAAGCTGGTTTACCAGAAGGGTGCGAAAATGGAGACTTAATCCCTTCGCCGGATAAATTTCCTGTGTTCTTTATAGCTACTAGGTTGCTTCAAGAGCCATTCGAGAAGCTATTGCTTCAGCATAAGCCTGATTGTGTCATTGCTGATGTGTTCTTCCCTTGGGCTACTGATTCTGCTTCCATGGTTGGAATTCCCAGGCTTGTGTTTAACGGGACTGGTTTTTTCTCCATGTGTGCTCTCGAATGTATGAGACTCTATGAGCCGCAAAAGAATGTTTCTTCAGATTCGGAACCCTTTGTGATTCCCAATCTACCTGGCGAGATTAAAATGTTGAGGACGCAGTTGCCGCCTGCTTCGATCACCGGCGAAACAAATCCACTGACTGAATTCTTTAAGGAAGCCAATGAATCAGAGGGGAAGTGCTATGGCGTGGTTGTTAACAGCTTCTACGAACTCGAGAGCGTTTATGCAGATTATTCCAGGAATGGGCTCGGAAGAAAAGCTTGGCATATTGGTCCTCTTTCTCTTTGCAATAAAGATACTGAAGAGAAATCTCAAAGAGGAAAAGATGCATCTATTGATGAAAACGAGTGTTTGAAGTGGCTCGACACAAAGAAGCCCAATTCAGTTGTGTACATTTGCTTCGGAAGTATAGCGAACTTTGAAGATTCTCAGCTTAGAGAAATTGCTTTGGGTCTTGAGGCTTCAGGGCAAGATTTCATTTGGGTGGTGAAAAACAACAAGAAAGAGGGAGAAGCTAAAGAGGAATGGCTTCTGGAAGGGTTCGAGAAAAGAATGGAAGGAACGGGATTAATCATAAGAGGTTGGGCGCCACAAGTGTTGATTCTTGGGCACCAAGCAATAGGAGCGTTTGTAACGCATTGCGGTTGGAATTCGACTTTGGAAGGAGTGGCTGCTGGGGTGCCAATGGTAACTTGGCCTATGGGGGCAGAGCAATTTTACAATGAGAAATTGGTGACTGAGGTTCTTAAGATTGGTGTGCCTGTTGGTGTAAAAAAATGGGCAAGAATGGTTAAGGTTAGTGTTGAATGGGAGGCAATAGAGAAGGCTGTGAAGAAGATAATGGTAGGAGAAGAAGCAGAGGAAATGAGAATGAAGGCGAACGTGTTGTCACAGTTGGCTAACGCTGCTGTTGAAAATGGAGGATCATCATACTCTGATTTGGGTGCACTCATTCATGAGTTGGTTTCCCTGAGGCATTGA 1449 0.4458 MGRESSSLHIFFFPFLSHGHMIPMVDMAKLFASRGVKSTIVTTPVNASLISKAIGKSKTHNNNNIHIETIEFPCSKAGLPEGCENGDLIPSPDKFPVFFIATRLLQEPFEKLLLQHKPDCVIADVFFPWATDSASMVGIPRLVFNGTGFFSMCALECMRLYEPQKNVSSDSEPFVIPNLPGEIKMLRTQLPPASITGETNPLTEFFKEANESEGKCYGVVVNSFYELESVYADYSRNGLGRKAWHIGPLSLCNKDTEEKSQRGKDASIDENECLKWLDTKKPNSVVYICFGSIANFEDSQLREIALGLEASGQDFIWVVKNNKKEGEAKEEWLLEGFEKRMEGTGLIIRGWAPQVLILGHQAIGAFVTHCGWNSTLEGVAAGVPMVTWPMGAEQFYNEKLVTEVLKIGVPVGVKKWARMVKVSVEWEAIEKAVKKIMVGEEAEEMRMKANVLSQLANAAVENGGSSYSDLGALIHELVSLRH 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01860 482 Gene3D Glycogen Phosphorylase B; 6 274 - -
Aip10g01860 482 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 478 - -
Aip10g01860 482 CDD GT1_Gtf-like 8 477 IPR002213 GO:0008194
Aip10g01860 482 PANTHER GLYCOSYLTRANSFERASE 6 477 - -
Aip10g01860 482 Gene3D Glycogen Phosphorylase B; 275 461 - -
Aip10g01860 482 PANTHER UDP-GLUCOSYL TRANSFERASE 73B2-RELATED 6 477 - -
Aip10g01860 482 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 282 404 IPR002213 GO:0008194
Aip10g01860 482 ProSitePatterns UDP-glycosyltransferases signature. 351 394 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01860 Aip-Chr10 52620712 52622239 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01860 1 477 Glycosyltransferase AT2G15490 55.579 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01860 K23260 - gmx:100818708 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01860 10 52620712 52622239 Aip10g01860 10 52620712 52622239 ECH