Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01757 ATGGGGACAGTTGACGTTGACCAAGCATTCATCCAAGAACCAGAACACAGGCCAAGTCTCTCCATCATTGAAGGACAAGGGATTCCAGTCATAGACCTCTCCCCTGTAACATCAAACAACCCTTCTCTTTCTTCCATTGACGCGCTGGTGAAGGAGATCGGAAGCGCGTGCAAGGAATGGGGATTCTTCCAAGTAACAAACCATGGTGTGCCTCTCTCTCTGAGGCGGAACCTTCTGGAAGCTTCCAAGAGCTTCTTTGCTCAGAGCTTCCAAGATAAGAAGAAAGTTAGCAGAGATGAAACGTCTGCCAGCGGTTACTATGACACTGAGCACACAAAGAACGTTAGGGATTGGAAGGAAGTGTTTGATTTTCTAGCCAAAGAACCTACTCTTTTTCCCCTCACTTCTGATGAACACGATGATCGAATCCTTCATTGGACTAATAAAAATCCTCAACACCCTCCACACTTCAGAGATATACTAAAGGAGTATATCAAGGAGATGGAAAAGCTAAGCTACAAATTGTTGGAGCTGATTGCTCTGAGCTTGGGACTTGAATCTAAGAGGTTCGAAGAATTCTTCGGAGACCAAACAAGCTTTGTTCGATTGAACTATTACCCTCCATGCCCTTACCCTCACCTAGCTCTTGGGGTGGGTCCACACAAGGACTCTGGTGCCTTAACCATTCTTGACCAAGACGATGTTGGAGGTCTTCAAGTCAAACGCAAGACGCACGACCAAGAATGGATCAACGTTGAACCAATCCCACATGCTTATATCATCAATCTCGCTGATATGATTCAGGTTTGGAGCAATGGTGCATATGAGAGTGTGGAACACAGAGTAATAGTTAACTCGGAGAAGGAAAGGTTTTCCATTCCATACTTCTTGTTCCCTGCACATGACATTGAAGTGAAGCCATTGAAGGAGCTGATACATGAACACAACCCTCCAAAATATCGGCCTTACAAGTCAGGGAAGTTTCTTCTCAAAAGATTTGAAGGCAATTTCCAGAAACATAGAGAGGAGAACCTTCAAATTCATCACTTTAAGATAGCCTAA 1062 0.4435 MGTVDVDQAFIQEPEHRPSLSIIEGQGIPVIDLSPVTSNNPSLSSIDALVKEIGSACKEWGFFQVTNHGVPLSLRRNLLEASKSFFAQSFQDKKKVSRDETSASGYYDTEHTKNVRDWKEVFDFLAKEPTLFPLTSDEHDDRILHWTNKNPQHPPHFRDILKEYIKEMEKLSYKLLELIALSLGLESKRFEEFFGDQTSFVRLNYYPPCPYPHLALGVGPHKDSGALTILDQDDVGGLQVKRKTHDQEWINVEPIPHAYIINLADMIQVWSNGAYESVEHRVIVNSEKERFSIPYFLFPAHDIEVKPLKELIHEHNPPKYRPYKSGKFLLKRFEGNFQKHREENLQIHHFKIA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01757 353 Pfam 2OG-Fe(II) oxygenase superfamily 199 299 IPR044861 -
Aip10g01757 353 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE, NON-HEME DIOXYGENASE DOMAIN-CONTAINING PROTEIN-RELATED 4 344 - -
Aip10g01757 353 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 197 299 IPR005123 -
Aip10g01757 353 PRINTS Isopenicillin N synthase signature 53 70 - -
Aip10g01757 353 PRINTS Isopenicillin N synthase signature 221 242 - -
Aip10g01757 353 PRINTS Isopenicillin N synthase signature 287 305 - -
Aip10g01757 353 Gene3D - 1 340 IPR027443 -
Aip10g01757 353 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 4 344 - -
Aip10g01757 353 Pfam non-haem dioxygenase in morphine synthesis N-terminal 28 152 IPR026992 -
Aip10g01757 353 SUPERFAMILY Clavaminate synthase-like 5 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01757 Aip-Chr10 41742563 41746069 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01757 14 352 Glycosyltransferase AT5G59530 32.948 1.91e-55 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01757 - - ahf:112718217 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01757 10 41742563 41746069 Aip10g01757 10 41742563 41746069 ECH