Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01737 ATGGGAGTAGACATCGACCAAGCTTTCGTCCAAGACCCACAACACAGACCGGGTCTCTCCATAACCCAAGCTCAAGGAATTCCATTGATCGACCTCTCCCCAGTAACAACAACCAACCCTTGTCCTTCTTCCATGGACGCGCTGGTGAAGGAGATCGGAAGCGCGTGCAAGGAATGGGGATTCTTCCAAGTTATAAACCACGGTGTTTCCATCCCTCTGAGGGAGAAGCTTCAGGAAGCTTCCAAGAAGTTCTTTGCACAAAGCTTGGAAGATAAGAAGAAGGTTAGCAGAGATGAAACGTCTCCAAGCGGTTACTATGACACTGAGCATACAAAGAATGTTAGGGATTGGAAGGAAGTCTTTGATTTTCTTACAAAAGATCCAACCCTTGTTCCTCTCACTTCTCATGAATCTGATGACAGACTCGTTCACTGGACTAATAAATCTCCTCACTATCCTCCAGGTTTCAGAGATATAATTAAAGAGTATATTGAAGAGATGGAAAAGCTAGCACGCAAGTTGATGGAGCTTATAGCCATGAGCTTAGGCCTCGAAGTTAAGAGATTTGAAGAATTCTTTAAAGAACAAACCAGCTTTATTAGATTGAATCACTATCCTCCATGCCCTTACCCTCACCTAGCTCTTGGTGTGGGTCGACACAAGGACCCTGGTCCCTTAACCATTCTTGCCCAAGATGATGTTGGAGGGCTTGAAGTCAAACTCAAACACAAGACGGACCAAGAGTGGGTCAGAGTGGAACCAACCCCCAATACTTATATCATCAATGTTGGTGATATTATGCAGGTTTGGAGCAACGATGCATATGAGAGTGTGGAGCACAGAGTGATGGTTAATTCAGAAAAAGAAAGGTTTTCAATTCCGTACTTCTTGTTCCCTGCACATGACACTGAAGTGAAGCCATTGGAGGAGCTAACAAATGAGAACAACCCTCCAAAATATAGGCCATACAAGTGGGGCAAGTTTCTTATCCACAGAAAGGACAGCAATTTTCAGAAACAAAATGTGGAAAATATCCAAATTCATCACTTTAAGATAGCTTAA 1062 0.4341 MGVDIDQAFVQDPQHRPGLSITQAQGIPLIDLSPVTTTNPCPSSMDALVKEIGSACKEWGFFQVINHGVSIPLREKLQEASKKFFAQSLEDKKKVSRDETSPSGYYDTEHTKNVRDWKEVFDFLTKDPTLVPLTSHESDDRLVHWTNKSPHYPPGFRDIIKEYIEEMEKLARKLMELIAMSLGLEVKRFEEFFKEQTSFIRLNHYPPCPYPHLALGVGRHKDPGPLTILAQDDVGGLEVKLKHKTDQEWVRVEPTPNTYIINVGDIMQVWSNDAYESVEHRVMVNSEKERFSIPYFLFPAHDTEVKPLEELTNENNPPKYRPYKWGKFLIHRKDSNFQKQNVENIQIHHFKIA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01737 353 Pfam 2OG-Fe(II) oxygenase superfamily 198 299 IPR044861 -
Aip10g01737 353 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 4 344 - -
Aip10g01737 353 SUPERFAMILY Clavaminate synthase-like 5 337 - -
Aip10g01737 353 Coils Coil 160 180 - -
Aip10g01737 353 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 196 299 IPR005123 -
Aip10g01737 353 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE, NON-HEME DIOXYGENASE DOMAIN-CONTAINING PROTEIN-RELATED 4 344 - -
Aip10g01737 353 Pfam non-haem dioxygenase in morphine synthesis N-terminal 27 134 IPR026992 -
Aip10g01737 353 PRINTS Isopenicillin N synthase signature 52 69 - -
Aip10g01737 353 PRINTS Isopenicillin N synthase signature 177 193 - -
Aip10g01737 353 PRINTS Isopenicillin N synthase signature 287 305 - -
Aip10g01737 353 Gene3D - 3 339 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01737 Aip-Chr10 41353329 41355414 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01737 27 321 Glycosyltransferase AT5G59530 33.444 6.41e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01737 - - gmx:100810801 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01737 10 41353329 41355414 Aip10g01737 10 41353329 41355414 ECH