Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01627 ATGTTCTGTTCTGTGTCCACATCTGTTGCAACTTGTTGTGTGTACTGTCAACTGTGTGTACTGTACCAATATCAAGAGGCACAGTTATTGAGCAAAGTCATGGGAAGGTTGTTTGTGATCAATCTTGAAGGGAAGATCTATAGCTGCAAACACTGCCGCACCCACCTTGCCATATCTGAAGACATCATCTCCAAGGCCTTCCATTCCAGACATGGGAAAGCTTATCTTTTCAACAAGGTTGTGAATGTTTCTGTTGGAGAAAAAGAGGAGAGGACGATGATAACTGGATTGCATACTGTGGCTGACATATTCTGTGTTGGTTGCGGATCAATCCTTGGTTGGAAATATGAGATTGCTCATGAGAAAAACCAGAAGTACAAGGAAGGAAAATCGGTGCTCGAGCGGTGA 408 0.4338 MFCSVSTSVATCCVYCQLCVLYQYQEAQLLSKVMGRLFVINLEGKIYSCKHCRTHLAISEDIISKAFHSRHGKAYLFNKVVNVSVGEKEERTMITGLHTVADIFCVGCGSILGWKYEIAHEKNQKYKEGKSVLER 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01627 135 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 46 134 IPR004910 -
Aip10g01627 135 ProSiteProfiles Yippee domain profile. 45 135 IPR034751 -
Aip10g01627 135 PANTHER PROTEIN YIPPEE-LIKE 34 135 - -
Aip10g01627 135 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 34 135 IPR039058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01627 Aip-Chr10 33579654 33582339 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01627 - - adu:107469509 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01627 10 33579654 33582339 Aip10g01627 10 33579654 33582339 ECH
Aip10g01627 10 33579654 33582339 Aip07g00861 07 10021820 10025013 PCT