Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01620 ATGAACTCGAATGGGTCCCACTCCCCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCTCCCGCCTCTATTTCTGGGACTACCACGCCAACTCTCTCCACCGCCTCTCTCTCCGCCTCGGCGACCCCGACCCTACCTCCGTTCTCGCCTCTTCCCCCTCGAAGGTATTGCAAACTGACGTGGAGCTCGGCTTTGATGTTGAGAGAATCTCTATCAACAGAAATGGAACTGCGATGCTACTTTTCGGTTCTTATAGACTCTCTGTTATGTATCTCTATGGACGTGCTTCCAAGAAAGATGTCAATTTGATATGCAGGACTATTGCAGTTGGTCCAGAAACTTATTCCAGCGGCAGCAACGATATTCGTGTATTACAAGCGATATGGCACCCTTACAGTGATACTCATTTGGGAATCCTTTCTTCTGATTCAGTTTTCCGGCTTTTCAATCTGGCTATAGATCCTTTGCTGCCAGAGCAAGAATATTATCTGCAACCTGTGGAGCCTGGTAGATCAAGGAATGCCTCATCAGTGTGCCCAGTAGATTTTTCTTTTGGGGGTGACCATTTATGGGACAGGTTCAGTGTTTTTATTTTATTCAGTGATGGAGCTATCTTTGTCCTTTGCCCTGTTGTTCCATTTGGAAGCCACTTCAAATGTGAGTCCTTATTAGAAATATACAATGATGCACATACATTTGGCCTGAAATCAGCCAACTCTTTAGCGGCTAGTAATTCAAAATTGGCAATCTCCTGGTTAGAAGCAACCGTTCCTGAATTGCTGAACCAAGAGACAGAAGGAGACAACCATTCTTTGCTGAGAGCTAATGCTTATGCTATATTTGATGCATCACTTGTCTTGCAGGGACCTCTGAGAAGAGTAGGTCAGGGTCGAAATGAAGATTCATTTGGTCGTAGTATTGAATGTGAAGGTCGTGCAGTTAGTTTTCTATACAATTTAGTCAGCAAAGACTCTATTTTAGTTACCTCCTGGAGTGGTGGACAATTACAGATAGATGCTCTAGCTGATGAGGTCCAACCTCTCTGGACTGTTGGTAGTCCACCTCGTCTCCGTGTCGATTCCCATGACCAAATTCTTGGCCTTGCTATGATTTGTGAAGCAACTGCCATTGACTGTCTTGATAGACTTGATCACAATGCCTGGTTGGGCAATCCACCCCCTTTGCTGAGGCTGGCTATTGTAGATTTGGCACTGCCACGTAGAGCAGAAAGTGGTTACAGTATTTCTTTGTTCAGTGATACTCTTATGCCAGAAAGAATATATTCCCTTCATGATGGAGGGATTGATTCAATAGTATTGCATTTTCTTCCATTCACGAGTCAATCAAATGGGAAGGATGATACAATGAGAACGCCTTCTGTGCATCCTGTTCTTAATACATGCCAGAGTGGTTGTACGTCAGAGCCTTCACTCTGTGGTTTCCTATCATTGTCCGATTCATTTGGATATTCGTGGATAGTGGCTGTCACTCTTTCTCAAGAATGTGTTGTCCTAGAGATGAAAACTTGGAACCTCTTGCTTCCAATAAGCATTGATGCAGAGAAGCCGTCAATTCAAGTGGAAGGAGAATCAAAAGAGAGAGACAAACTAACTATAATTAGCAAAGAACTACTTGGTGGGCCCAAGGAGGTACTTGTTCCTCAGGCAGCTCCATCTTTGCGTTCTGTTGCAGCTGATTCAATTGAAGGCAGATCTACATTACATCAGTATTTCAAGCTGTTTCATGAAACTTATGTGGAGTATGCACATAAGGTGTATCTGGAGCTCAAACATCATGCACCTCAGTTGAAGAAAATCATTAATGATCAACAGTCTCGTTTGGGTGATGCACAGCAGAAACTCATAAAAGTTGAGGAGAAAGAGTCTATGTTACAGAAAAGGATAGAACACCACTTCAGAGAAGTTGAGTTGGATGCCTTGCATTCTTCCGTTGATGCGCTAAATGAAAGGCTAAGAAGACACATGCAAGCATCCACTAATGCTAGTCGCCAACAACAAAGAATAGCAGGGAAGAAAGTTGGTGCTGGGGAGGACCAGATGTCTATGCTCAAATCATCCCTTGAAAAACTCACCCTCGTAAATACTGAAAATTCAAAGAAAGTTAAGCTTGTTGAGTCTACTCTGAAAAACAAAGAAAAAAGCAGCAGAGAACCAAGCCTGCCTTTGCTTTAA 2277 0.4115 MNSNGSHSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRLYFWDYHANSLHRLSLRLGDPDPTSVLASSPSKVLQTDVELGFDVERISINRNGTAMLLFGSYRLSVMYLYGRASKKDVNLICRTIAVGPETYSSGSNDIRVLQAIWHPYSDTHLGILSSDSVFRLFNLAIDPLLPEQEYYLQPVEPGRSRNASSVCPVDFSFGGDHLWDRFSVFILFSDGAIFVLCPVVPFGSHFKCESLLEIYNDAHTFGLKSANSLAASNSKLAISWLEATVPELLNQETEGDNHSLLRANAYAIFDASLVLQGPLRRVGQGRNEDSFGRSIECEGRAVSFLYNLVSKDSILVTSWSGGQLQIDALADEVQPLWTVGSPPRLRVDSHDQILGLAMICEATAIDCLDRLDHNAWLGNPPPLLRLAIVDLALPRRAESGYSISLFSDTLMPERIYSLHDGGIDSIVLHFLPFTSQSNGKDDTMRTPSVHPVLNTCQSGCTSEPSLCGFLSLSDSFGYSWIVAVTLSQECVVLEMKTWNLLLPISIDAEKPSIQVEGESKERDKLTIISKELLGGPKEVLVPQAAPSLRSVAADSIEGRSTLHQYFKLFHETYVEYAHKVYLELKHHAPQLKKIINDQQSRLGDAQQKLIKVEEKESMLQKRIEHHFREVELDALHSSVDALNERLRRHMQASTNASRQQQRIAGKKVGAGEDQMSMLKSSLEKLTLVNTENSKKVKLVESTLKNKEKSSREPSLPLL 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01620 758 Coils Coil 635 655 - -
Aip10g01620 758 MobiDBLite consensus disorder prediction 691 711 - -
Aip10g01620 758 Coils Coil 672 699 - -
Aip10g01620 758 Pfam Nuclear pore component 49 214 IPR019321 -
Aip10g01620 758 MobiDBLite consensus disorder prediction 739 758 - -
Aip10g01620 758 PANTHER NUCLEOPORIN NUP84-RELATED 48 666 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
Aip10g01620 758 PANTHER NUCLEOPORIN NUP84-RELATED 666 748 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01620 K14318 - gmx:100801853 1168.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01620 10 33253245 33258729 Aip10g01620 10 33253245 33258729 ECH