Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01593 ATGAATGCTCCATTGTCACATTATTTCATATTTACCGGGCACAATTCCTATCTGATTGGGAACCAACTAACCAGTGATTGCAGTGATGTGCCAATCATAGATGCTTTGGTACGAGGTGTGCGAGTGATTGAACTTGATTTATGGCCGAATTCAACTAAAGATGATGTTGAGGTTTTTCATGGAAGAACTCTTACCACTCCCGTCTCACTAAGGCAATGTTTGTGGTCCATAAGAGAGCATGCTTTTGTTACATCTAAGTATCCTGTCATTATAACTTTTGAAGACCACCTTACTCCTGATCTTCAGGCTGTAGTTGCAGAGATGGTGACTGAAATATTTGGGGAACTGCTTTATTATCCTGAGACAGATTTGCTGTCTGAATTCCCCTCCCCAGAATCGTTGAAAGGTCGAATTCTCATATCAACTAAACCACCAATAGAATATCTTGATTCCAAATCTTGTGACGACGAAGACAAAAAAACGAAATCAGCTGACAAAGGATCACAATCACCAGATGTTACTAATAAAGTGGAAAGTGATGACAAAGATGTGGAAGATTTGAATGAAAGTGATGAAAAATCATACAAGGAGAGTGCACCTAAGTATAAACGTCTGATTACAATCCATGCTGGCAAATCAAAGGGTGATTTTCAGGAAGACTTGAAGGTTGCTGGTAAAGTTAAGCGTTTGAGCTTAAGTGAAAGTAAACTTGAAAAGGCTTCTGAATCTTTTGCACCTGACATTGTAAGGTTCACCCAGAAGAATATTCTCAGAGTGTATCCAAAGGGAACACGCATAACCTCCTCTAATTACAAGCCACACATAGCATGGACGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGGCATGGCAAATCACTTTGGTTCATGCAAGGGATGTTCAAAGCAAATGGAGGGTGTGGCTATGTGAAAAAACCTGATTTTCTTGTCGAAAAAGGTCCGAATAACGAGGTTTTCGATCCTAAAAGAACATTGCCGGTGAACAAGACATTAAAGGTAAAAGTCTACTTGGGGACAGGTTGGAGCTCAGATTTCAGCCTAACGGACTTCGATTCCCATTCACCACCAGACTTCTATGTGAAGATTGATATTGCTGGAGTACCTGCTGATAGAGCGAAGAAGAAAACAAAGACAATTAAAAATAACTGGTTTCCCGTGTGGGAAGAAGAGTTTGAATTCCCATTAAGTGTCCCAGATCTGGCTTTGCTACGTATACAAGTTAAAGAAGAAAATAGAACTGAGAAGGATGATTTTGCTGGCCAGACATGTTTGCCAGTCACAGAGCTCAAGTCTGGATTTCGTTCAGTCCCTCTCTATGATGAAAAGGGCGAGAAATATAAATCTGTCAAGCTTTTAATGCGGTTTCAATTCAAATGA 1401 0.4033 MNAPLSHYFIFTGHNSYLIGNQLTSDCSDVPIIDALVRGVRVIELDLWPNSTKDDVEVFHGRTLTTPVSLRQCLWSIREHAFVTSKYPVIITFEDHLTPDLQAVVAEMVTEIFGELLYYPETDLLSEFPSPESLKGRILISTKPPIEYLDSKSCDDEDKKTKSADKGSQSPDVTNKVESDDKDVEDLNESDEKSYKESAPKYKRLITIHAGKSKGDFQEDLKVAGKVKRLSLSESKLEKASESFAPDIVRFTQKNILRVYPKGTRITSSNYKPHIAWTHGAQMVAFNMQGHGKSLWFMQGMFKANGGCGYVKKPDFLVEKGPNNEVFDPKRTLPVNKTLKVKVYLGTGWSSDFSLTDFDSHSPPDFYVKIDIAGVPADRAKKKTKTIKNNWFPVWEEEFEFPLSVPDLALLRIQVKEENRTEKDDFAGQTCLPVTELKSGFRSVPLYDEKGEKYKSVKLLMRFQFK 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01593 466 SMART plcx_3 1 143 IPR000909 -
Aip10g01593 466 ProSiteProfiles C2 domain profile. 319 448 IPR000008 -
Aip10g01593 466 MobiDBLite consensus disorder prediction 175 196 - -
Aip10g01593 466 SMART C2_3c 338 446 IPR000008 -
Aip10g01593 466 SUPERFAMILY PLC-like phosphodiesterases 1 319 IPR017946 GO:0006629|GO:0008081
Aip10g01593 466 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 338 465 IPR035892 -
Aip10g01593 466 MobiDBLite consensus disorder prediction 150 166 - -
Aip10g01593 466 Pfam C2 domain 339 440 IPR000008 -
Aip10g01593 466 MobiDBLite consensus disorder prediction 150 196 - -
Aip10g01593 466 Gene3D Phosphatidylinositol (PI) phosphodiesterase 1 330 IPR017946 GO:0006629|GO:0008081
Aip10g01593 466 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 228 316 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aip10g01593 466 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 1 465 - -
Aip10g01593 466 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 1 143 - -
Aip10g01593 466 Gene3D C2 domain 333 466 IPR035892 -
Aip10g01593 466 PRINTS Phospholipase C signature 4 22 IPR001192 GO:0035556
Aip10g01593 466 PRINTS Phospholipase C signature 30 50 IPR001192 GO:0035556
Aip10g01593 466 PRINTS Phospholipase C signature 127 144 IPR001192 GO:0035556
Aip10g01593 466 PRINTS Phospholipase C signature 256 277 IPR001192 GO:0035556
Aip10g01593 466 PRINTS Phospholipase C signature 277 295 IPR001192 GO:0035556
Aip10g01593 466 PRINTS Phospholipase C signature 432 442 IPR001192 GO:0035556
Aip10g01593 466 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 231 317 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aip10g01593 466 SMART plcy_3 202 318 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aip10g01593 466 CDD C2_PLC_like 337 466 - -
Aip10g01593 466 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 465 IPR001192 GO:0035556
Aip10g01593 466 Pfam Phosphatidylinositol-specific phospholipase C, X domain 1 143 IPR000909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01593 Aip-Chr10 32157970 32163541 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01593 1 466 Acyl Lipid Metabolism Gene Families AT2G40116 65.126 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01593 K05857 - gmx:100799027 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01492 07 26293491 26299349 Aip10g01593 10 32157970 32163541 ECH
Aip10g01593 10 32157970 32163541 Aip10g01593 10 32157970 32163541 ECH