Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01568 ATGTATGTTCCCCATACGGATCTCCCCCCTTCATCCAAGCCCGAGCCAAATACCAAGCCCGATGTCGGCCCAGTCATCTGTCTTTTATACTACATCACCGTTGAACAACTCAATCACATACAGACACTTGCAACCTCAAATAGTGCTAAGCCCACAAAACTTGAGTCCATATCAACGTTCTTGTGGAAGTTGGTAGCTTCAGGCGCTATTTCCTCCGAAACTGGTTATGGTTGCAACAAAAGGGTGAGAGTTGCCAAGATGGGTGTAATCCTTGATGGAAGTAGGAGGTTGAGCAATGACAAGAAGGAAGCAATGATGAGTTCTTACTTTGGAAACATGCTTTCCATTCCATTTGGTGGCAAACCAATAAATGAGCTAGTGGAGAAGCCGCTAAGTGTGGTAGCCGAGGAGGTGGATGACTTGGAAGTAGTTAGTGAATATTACCAAAATAGAGGTTGCTTCAATAATGAGCATTGGAAGGAACTGACCTATTTGTATATCCAATATGATGAGTTCGATAATGCTGCAACCAACATCATGAACCATTCGCCTGAAGCATGGGATCACCTGCAGTTCAAAGATGTCATTGTCAAAGTTGCAAATGTGGAGTTGTATTACAAGGCTGTTCACTTCTATTTGCAAGAGCATCCCGATCTTATCAATGATGTTCTGAATGTCCTTGCACTTCGTTTTGTTGACATCATGCGGAAGGTAGCATCAGTAATGGAAAAACTTTCATTAGATATTATTATTGTATAA 759 0.4203 MYVPHTDLPPSSKPEPNTKPDVGPVICLLYYITVEQLNHIQTLATSNSAKPTKLESISTFLWKLVASGAISSETGYGCNKRVRVAKMGVILDGSRRLSNDKKEAMMSSYFGNMLSIPFGGKPINELVEKPLSVVAEEVDDLEVVSEYYQNRGCFNNEHWKELTYLYIQYDEFDNAATNIMNHSPEAWDHLQFKDVIVKVANVELYYKAVHFYLQEHPDLINDVLNVLALRFVDIMRKVASVMEKLSLDIIIV 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01568 252 Pfam Transferase family 29 162 - -
Aip10g01568 252 Gene3D Tetratricopeptide repeat domain 150 251 IPR011990 GO:0005515
Aip10g01568 252 PANTHER CLATHRIN HEAVY CHAIN RELATED 156 240 - -
Aip10g01568 252 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 153 221 IPR000547 GO:0006886|GO:0016192
Aip10g01568 252 Pfam Region in Clathrin and VPS 153 218 IPR000547 GO:0006886|GO:0016192
Aip10g01568 252 PANTHER CLATHRIN HEAVY CHAIN 1-RELATED 156 240 - -
Aip10g01568 252 SMART CLH_2 90 221 IPR000547 GO:0006886|GO:0016192
Aip10g01568 252 SUPERFAMILY ARM repeat 150 237 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01568 Aip-Chr10 29979050 29982976 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01568 K04646 - adu:110276793 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01568 10 29979050 29982976 Aip07g00833 07 9290929 9303215 PCT