Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01518 ATGCTTCTGGGAGCTGCACCCTCTTCTTGTTTCCCTTCCTTTTCTCCCCTCAACGGTGGCGGTGACCAGCTGGTCCCTCTCTTTTCTTCTGTTTCAACGTTGACTTCTTCTTCTTCGGGGAAGAGTGGTTTGGTTGTTATGTGTGCTGCGACGAAGGGAGGCTCTAACAGCAAGCCGTTAAGCGGCGTCATTTTCGAGCCGTTTGAAGAGGTGAAGAAGGAGCTCGACCTTGTCCCTACCTTACCTCAAGCTTCCCTCGCCAGACAGAAGTTCGTCGATCAGTGTGAAGCCGCCATTAATGAACAGATCAATGTGGAGTACAATGTTTCATACGTTTACCATGCGATGTTTGCTTACTTCGATAGGGATAACGTGGCGCTGAGGGGTCTTGCCAAGTTTTTCAAGGAATCAAGTGCAGAGGAAAGGGAGCACGCTGAGAAATTGATGGAGTACCAGAATAAAAGGGGTGGAAGAGTGACGTTGCAATCTATAGTGATGCCACTCTCTGAGTTTGATCATGTGGAAAAGGGGGATGCACTTTATGCAATGGAACTTGCTCTTTCATTGGAGAAGCTAACAAACGAGAAGCTCCTTAATTTGCACAGTGTTGCCACTAAGAACAATGACGTGCAGTTGGCAGATTTCATTGAAAGCGAGTTCTTGGGTGAACAGGTGGAAGCCATTAAGAAAATATCAGAGTATGTTGCTCAGCTCAGAAGAGTTGGCAAAGGACATGGTGTGTGGCACTTTGATCAGATGCTGCTCCATGGAGATGGAGTTGCTGCTTGA 789 0.474 MLLGAAPSSCFPSFSPLNGGGDQLVPLFSSVSTLTSSSSGKSGLVVMCAATKGGSNSKPLSGVIFEPFEEVKKELDLVPTLPQASLARQKFVDQCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSAEEREHAEKLMEYQNKRGGRVTLQSIVMPLSEFDHVEKGDALYAMELALSLEKLTNEKLLNLHSVATKNNDVQLADFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHGDGVAA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01518 262 Gene3D - 58 257 IPR012347 -
Aip10g01518 262 PANTHER FERRITIN-2, CHLOROPLASTIC 22 260 - -
Aip10g01518 262 ProSiteProfiles Ferritin-like diiron domain profile. 89 242 IPR009040 -
Aip10g01518 262 SUPERFAMILY Ferritin-like 83 256 IPR009078 -
Aip10g01518 262 Pfam Ferritin-like domain 97 241 IPR008331 GO:0008199
Aip10g01518 262 CDD Euk_Ferritin 93 252 - -
Aip10g01518 262 ProSitePatterns Ferritin iron-binding regions signature 1. 140 158 IPR014034 -
Aip10g01518 262 PANTHER FERRITIN 22 260 IPR001519 GO:0006826|GO:0006879|GO:0008199
Aip10g01518 262 ProSitePatterns Ferritin iron-binding regions signature 2. 209 229 IPR014034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01518 Aip-Chr10 27954586 27957477 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01518 K00522 - gmx:547476 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01410 07 23861312 23865384 Aip10g01518 10 27954586 27957477 ECH
Aip10g01518 10 27954586 27957477 Aip10g01518 10 27954586 27957477 ECH
Aip10g01518 10 27954586 27957477 Aip07g00812 07 8950986 8952769 PCT