Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01501 ATGTCCAAACCTTCTTCCTCTGATCCTCTCCAACCACCACTCTTCGATCCCAAGCAACCTTCAGTACCAATTTCATACCCAATCAAAACCCTAGAGGATCTCAAAACTCGCACCTACTTCAATTCCTTTCACTATCCTTTTAACATTGCTTTGCTTCCAATGTCAAATCAAGCCGCTTCATCATCATCATCATCATCATCATCATCATTGCCTAATAGGAGAAGATTGTTGGTGTGTCATGACATGGCAGGTGGGTACTTAGATGACAAGTGGGTTCAAGGGGGGACCAACCCTGATGCTTATGCAATTTGGCATTGGCATTTGATCGATGTTTTTGTCTACTTTTCACACAATTTGGTTACTATTCCTCCTCCTTGTTGGACTAACACTGCTCATCGCCACGGAGTTAAGGTGCTGGGTACTTTCATCACCGAATGGGATGAGGGAAGAGCTGCCTGTGATGTGCTGCTTTCAACAAAGGAGTCTGCTCAAATGTATGCAGAACGTCTGGTGGAGCTTGCTGTTACTTTAGGCTTCGATGGCTGGCTAATAAATATGGAGGTAAATTTGGACCGAGGACAAATTCCTAACTTAAAAGAGTTTGTAGATCATTTATCGTCATTGATGCATTCATCTGTTCCTGGATCGTTAGTGCTTTGGTATGACAGCATTACAGTTGATGGTGATCTGAATTGGCAAGACCAACTAAACTATTACAATAAGCCTTTCTTTGACATATGTGATGGGATATTTGTTAACTATACGTGGAAGGAAAACTATCCAAGCCTCTCTGCTGCCGTTGCAGGTGATCGGAGGTTTGACGTGTACATGGGAATAGATGTATTTGGAAGGAACACATATGGTGGTGGACAGTGGAATGTAAATGTTGCTCTCGACGTACTAAGAAAGGATGATGTATCTGCTGCTATATTTGCTCCTGGATGGGTCTATGAAACAAAGCAACCACCAGATTTTGAGACTGCTAATAACAGTTGGTGGGATCTTGTGGAAAAGTCATGGGGAGTATTGCGTAAGTATCCTGGAGTATTACCGTTCTACACAAATTTTGATCAGGGACGCGGTTATCATTTTTCAATGGACGGAGACCTTATGTCGGATGCTACTTGGTGCAACATTTCTTGCCAAGGCTTTCAGCCGCATCTCAATTTTGCTGACTCTACAAATCCTATTCAAGTTTTTACAGACCTGAAGGGATCATCTTATAGTGGAGGAGGGAACATTACATTCAAAGGATCTCTTGAAGAGCATGCTCACTTTGAGAAGAAAATCTTTGAAGCGGAGTTTGTTTTGAGCGAGTTGCCTATCCACTTAACTTATTCTGTGAAATCTGATGGCAATTCTTCGCTGGGACTTAAGCTTGCATTCGCTTCCTCCACCAACAAAAGAGAGTATATACTTCTTGCATCGCAACCGTTGAACAATTTCTCTGGAAAATTCAGCAAAGCAATCATTACAAATGGAAATAAAGGATCTTCACCTGGATGGGTTATAAATGAAGGTACAATCGCAATGAACGGATACACACTAGCGGAAATCCATGCAGTGTGCTATAGATGCGATTCTCCATCGAATAAGTTGAGATGGCTATACGGTTCAGATAGCAGCGATAGTTTTTCGGCTTCTACGTCAGATTATTTCGCAAGCCTTGGTCATATCTCAATCCAGACATTAGAATACAAGTCAGATTTTCCTGTGGCTTCTTCGTGGCAAGTCGACGCCAAATACATGAAATGGACGCCAGGTCCTCAGGGCTCAAAGATCCTTAGTCTTCAAATTTCTTGGGAACTGAAAGACGGAAAGAACCATCAATTCAGAAGCTACAATGTTTATTTGGTGAAATCGTCAAAACAAGAAGGTACAAGTTCAAGATTGGAACATGTGAAGGAGTACCTTGGAGTGGCACAAGCAAAATGTTACTATGTTTCTGAGCTTAAAGTTCCTTCTGGAACTTATAGCCTCAAATTTATAATACAAGTGTGTGGTGATGATGGAACATTGCAGGAATTGGACGAGTCTCCATATTATGGATTGGAGGTTGAAGGTCCTCAAATTAGTATTACAATGTAA 2088 0.4157 MSKPSSSDPLQPPLFDPKQPSVPISYPIKTLEDLKTRTYFNSFHYPFNIALLPMSNQAASSSSSSSSSSLPNRRRLLVCHDMAGGYLDDKWVQGGTNPDAYAIWHWHLIDVFVYFSHNLVTIPPPCWTNTAHRHGVKVLGTFITEWDEGRAACDVLLSTKESAQMYAERLVELAVTLGFDGWLINMEVNLDRGQIPNLKEFVDHLSSLMHSSVPGSLVLWYDSITVDGDLNWQDQLNYYNKPFFDICDGIFVNYTWKENYPSLSAAVAGDRRFDVYMGIDVFGRNTYGGGQWNVNVALDVLRKDDVSAAIFAPGWVYETKQPPDFETANNSWWDLVEKSWGVLRKYPGVLPFYTNFDQGRGYHFSMDGDLMSDATWCNISCQGFQPHLNFADSTNPIQVFTDLKGSSYSGGGNITFKGSLEEHAHFEKKIFEAEFVLSELPIHLTYSVKSDGNSSLGLKLAFASSTNKREYILLASQPLNNFSGKFSKAIITNGNKGSSPGWVINEGTIAMNGYTLAEIHAVCYRCDSPSNKLRWLYGSDSSDSFSASTSDYFASLGHISIQTLEYKSDFPVASSWQVDAKYMKWTPGPQGSKILSLQISWELKDGKNHQFRSYNVYLVKSSKQEGTSSRLEHVKEYLGVAQAKCYYVSELKVPSGTYSLKFIIQVCGDDGTLQELDESPYYGLEVEGPQISITM 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01501 695 PANTHER BETA N-ACETYLGLUCOSAMINIDASE, PUTATIVE-RELATED 7 689 - -
Aip10g01501 695 Pfam Glycosyl hydrolase family 85 86 364 IPR005201 GO:0005737|GO:0033925
Aip10g01501 695 CDD GH85_ENGase 77 396 - -
Aip10g01501 695 Gene3D Glycosidases 17 346 - -
Aip10g01501 695 MobiDBLite consensus disorder prediction 1 21 - -
Aip10g01501 695 PANTHER ENDO BETA N-ACETYLGLUCOSAMINIDASE 7 689 IPR032979 GO:0033925
Aip10g01501 695 Gene3D - 349 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01501 Aip-Chr10 27310524 27317635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01501 19 687 Glycoside Hydrolase AT5G05460 54.505 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01501 K01227 - gmx:100806475 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01501 10 27310524 27317635 Aip10g01501 10 27310524 27317635 ECH