Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01481 ATGCCTTCTTCTCTTCAACTAGATCGATTCAACTTCACCGCAACCACAACCGCAACCGCAATTATTGCTAACGGTTTAAACTGTCCTAGGCAGCCGTTAGCGGCGGTTCCACTTCCGTTATCCAGCGGCTCTGATGTCGCCTTGCATCACCACGCGCACCGGGTTGGTTCCAACCAGTGTTGTTCCGTGATGACGCAGGCGATAGAGGCGCCGGTGTCTACGGTGTGGGAGGTAGTACGGCGCTTCGACAACCCGCAGGGGTACAAGAACTTCGTGAAGAGCTGCCACGTCATCGGAGGCGAGACTCCGATGCGTGTGGGCACAGTGAGGGAGGTGCGCGTGGTGTCGGGGTTGCCGGCGGTATCAAGCACGGAGAGGCTGGAGATACTGGACGACGAGCGCCACGTCATCAGTTTCAGTGTGGTGGGTGGGGACCACCGGTTGAGGAACTACCGGTCGGTGACAACGCTACACGCCGTGGAGGGCGGCAAGGGGACGGTGGTGGTGGAGTCGTATGTGGTGGACGTGCCGCCGGGGAACACGAAGGAAGAGACTTGCGTGTTCGTCGACACCATCGTTCGTTGCAACTTGCATTCTCTCGCTCAGATCACAGAGAATCGTACTTCTGAAAAACAACGATGA 642 0.5779 MPSSLQLDRFNFTATTTATAIIANGLNCPRQPLAAVPLPLSSGSDVALHHHAHRVGSNQCCSVMTQAIEAPVSTVWEVVRRFDNPQGYKNFVKSCHVIGGETPMRVGTVREVRVVSGLPAVSSTERLEILDDERHVISFSVVGGDHRLRNYRSVTTLHAVEGGKGTVVVESYVVDVPPGNTKEETCVFVDTIVRCNLHSLAQITENRTSEKQR 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01481 213 SUPERFAMILY Bet v1-like 60 203 - -
Aip10g01481 213 CDD PYR_PYL_RCAR_like 60 205 - -
Aip10g01481 213 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 34 209 - -
Aip10g01481 213 Gene3D - 39 213 IPR023393 -
Aip10g01481 213 Pfam Polyketide cyclase / dehydrase and lipid transport 61 202 IPR019587 -
Aip10g01481 213 PANTHER - 34 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01481 Aip-Chr10 26326508 26327581 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01481 K14496 - gmx:121174020 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00799 07 8718315 8719995 Aip10g01481 10 26326508 26327581 ECH
Aip10g01481 10 26326508 26327581 Aip10g01481 10 26326508 26327581 ECH
Aip10g01481 10 26326508 26327581 Aip07g00799 07 8718315 8719995 PCT