Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01461 ATGGAGTATCCTACTATTCTCATCTTTCTGTTAGCCATGTTTGTTCTCTTAACGTCCGCATTTTCCTCAGCAAATGCCAAAATTTGTGAGCACGAGTTTGTTGTTGAAGCAACACCAGTGAAGAGGCTGTGCAAAACTCACAATAGAATAACTGTGAATGGACAATATCCTGGCCCTACTTTGGAAGTCAACAATGGAGACACTTTGGTCGTCAAAGTCACTAACAAAGCTCGCTATAATGTCACCATTCACTGGCACGGTGTTAGGCAAATGAGAACAGGGTGGGCAGATGGACCAGAATTTGTGACACAGTGTCCTATTAGACCTGGAGAGAGTTACACATACAGGTTCACAATTCAAGGACAAGAAGGTACTCTTTGGTGGCATGCTCATAGCTCATGGCTAAGGGCCACTGTTTATGGAGCTTTAATCATTCGTCCTATACAAGGACACCCCTACCCTTTCCCTAAGCCTCACCGAGAAACACCCATTCTTCTAGGGGAATGGTGGGATGCAAACCCTATCGATGTGGTGAGGCAGGCCACAAGAACAGGAGCAGCTCCTAATGTCTCTGATGCCTACACTATTAATGGTCAACCTGGTGATCTCTATAAGTGCTCTACCAAAGGGACTAGCATTGTTACAATTGATTCCGGCGAGACCAACCTCCTCCGTGTGGTAAACGCAGCACTCAACCAACCACTGTTTTTCACCGTCGCCAACCACAAGCTGACGGTGGTTGGCGCCGATGCCTCTTACCTCAGGCCATTCACCACCAAAGTCCTTATGCTGGGCCCGGGCCAAACCACCGACGTCTTGATCACCGGCGACCAGCCAGCTTCCCGGTACTACATGGCGGCGCGTGCCTACCAATCAGCACAAAACGCTGCTTTTGACAACACCACCACAACCGCCATACTCCAATACAGGAAAAGTTCTGTTATGAAACCAATCATGCCATCACTTCCTGCTTACAATGACACAAATACAGTTACTGCATTCAGCAGAAGCTTCTTCAGCCTAAGAAAAGTTGAGGTTCCTACTCAGATTGACGACAATTTGTTTTTCACCGTTGGCTTGGGACTCAACAGGTGCCCACCAAATTTTAGGAAAAATCGATGCCAAGGACCAAACGGGACAAGGTTCACTGCAAGCATAAACAATGTCTCATTTGTTCTCCCAAACAAGATTTCCATCCTTCAAGCACACCAACTTGGAATTCCGGGAGTGTTCACCACTGATTTTCCGGCACAGCCAGCCGTGAAATTCGACTACACGGGCAATGTTAGCCGTTCGTTGTGGCAGCCGATTCGAGGGACTAAGGCTTACAAGCTAAAGTATGGGTCAAGAGTGCAGATTGTAATTCAGGACACTAGCATTGTGACCCCTGAGAACCACCCTATTCATCTTCATGGCTATGATTTCTACATTGTTGCTCAAGGTTTTGGAAATTTTGATGCCAAGAAAGATACATCAAAGTTCAACCTTGTTGATCCACCTTTGAGGAACACTGTGGCTGTGCCTGTGAATGGATGGGCAGTTATTCGGTTTGTTGCTGATAATCCAGGTGCCTGGCTTATGCATTGTCACTTGGATGTTCACATTACATGGGGTTTGGCCACAATCCTCTTAGTAGAGAATGGAAATGGAGAATTGCAATCCATAGAGCCCCCTCCATTGGATCTGCCTCTCTGTTAG 1698 0.4682 MEYPTILIFLLAMFVLLTSAFSSANAKICEHEFVVEATPVKRLCKTHNRITVNGQYPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGESYTYRFTIQGQEGTLWWHAHSSWLRATVYGALIIRPIQGHPYPFPKPHRETPILLGEWWDANPIDVVRQATRTGAAPNVSDAYTINGQPGDLYKCSTKGTSIVTIDSGETNLLRVVNAALNQPLFFTVANHKLTVVGADASYLRPFTTKVLMLGPGQTTDVLITGDQPASRYYMAARAYQSAQNAAFDNTTTTAILQYRKSSVMKPIMPSLPAYNDTNTVTAFSRSFFSLRKVEVPTQIDDNLFFTVGLGLNRCPPNFRKNRCQGPNGTRFTASINNVSFVLPNKISILQAHQLGIPGVFTTDFPAQPAVKFDYTGNVSRSLWQPIRGTKAYKLKYGSRVQIVIQDTSIVTPENHPIHLHGYDFYIVAQGFGNFDAKKDTSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGAWLMHCHLDVHITWGLATILLVENGNGELQSIEPPPLDLPLC 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01461 565 Pfam Multicopper oxidase 35 147 IPR011707 GO:0005507
Aip10g01461 565 ProSitePatterns Multicopper oxidases signature 1. 523 543 IPR033138 -
Aip10g01461 565 CDD CuRO_1_LCC_plant 31 147 IPR034288 GO:0005507
Aip10g01461 565 Gene3D - 159 343 IPR008972 -
Aip10g01461 565 Pfam Multicopper oxidase 415 547 IPR011706 GO:0005507|GO:0016491
Aip10g01461 565 PANTHER MULTI-COPPER OXIDASE 7 565 IPR045087 -
Aip10g01461 565 SUPERFAMILY Cupredoxins 347 565 IPR008972 -
Aip10g01461 565 PANTHER LACCASE 7 565 - -
Aip10g01461 565 CDD CuRO_2_LCC_plant 163 309 IPR034285 -
Aip10g01461 565 Gene3D - 16 147 IPR008972 -
Aip10g01461 565 ProSitePatterns Multicopper oxidases signature 2. 528 539 IPR002355 GO:0005507
Aip10g01461 565 SUPERFAMILY Cupredoxins 155 341 IPR008972 -
Aip10g01461 565 Gene3D - 369 565 IPR008972 -
Aip10g01461 565 SUPERFAMILY Cupredoxins 24 180 IPR008972 -
Aip10g01461 565 Pfam Multicopper oxidase 161 311 IPR001117 -
Aip10g01461 565 CDD CuRO_3_LCC_plant 410 548 IPR034289 GO:0005507
Aip10g01461 565 TIGRFAM laccase: laccase 26 565 IPR017761 GO:0046274|GO:0048046|GO:0052716
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01461 Aip-Chr10 25909906 25915130 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01461 K05909 - gmx:100808948 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01383 07 23256869 23261160 Aip10g01461 10 25909906 25915130 ECH
Aip10g01461 10 25909906 25915130 Aip10g01461 10 25909906 25915130 ECH
Aip10g01461 10 25909906 25915130 Aip07g00794 07 8626441 8629757 PCT