Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01449 ATGAAGCCAAACACCCAGGCTTCTTCCTTCGCCACTACTAAACCGCCGCACGTGACCTTCTTTCGCCGCTCACGTGCTCCCGTTCAACTAAACGACGCCGTGTGGACCGTGAAATGTCATCGTATCAACTTGTCCCTTCGCCACTCCAAGACCATAACCATAACTGCAGCCGCGAAGCCCGAGAATGACGGCGTAGCTGAAAACTCGGTCGGTCCGACCCGGCGAGTCGTGTTGGCGGCGCCATTTCTTGCCGCCGGCGCGTCGTTTCTGTTCTCGTCGGCAACGAGAGCGGATGATAAGGCTGTGACGGCGCCATCTCCTGTTTCGGCGCCTCCGCCTGCAGAATTGAAGGCGGCGAAGGTTGAGGAACCGAAGAAGAAGCAGAAGGAGGAGGAGGCGATAACGTCGAGGATTTACGACGCGACGGCGATCGGGGAACCGTTGGCAATAGGGAAGGACAAGGGGAAAGTGTGGGAGAAGCTGATGAACGCGCGCGTGGTGTATTTGGGGGAAGCGGAGCAGGTTCCGGTTCGCGACGACAAGGAATTGGAGCTCGAGATCGTTAAGAATTTGCAAAAGCGGTGCATAGAGAATGAGAAGCATTTGTCTTTGGCTCTTGAAGCTTTCCCTTCGAATCTTCAGGAACCGCTCAGTCAGTTCATGGATAACAAGATAGATGGAGAAACCTTAAAGTCTTATACAATGCATTGGCCGCCTGAAAGATGGCAGGAGTATGAACCTCTTCTTAATTACTGCCGTGAAAATGGAATCCGCCTTGTTGCTTGTGGCACCCCACTATCGATCTTAAGGACTGTACAAGCAGAAGGAATTCGTGGGCTTTCAAAAGCTGATCGTAAAGTATATGCACCTCCAGCTGGTTCAGGCTTCATATCAGGCTTCACTTCTATCTCACGTAAATCATCAGTTGATAGTATTCTAAATCCATCAGTTCCTTTTGGTCCAAGCTCATATCTTTCTGCACAAGCTAGAGTTGTAGAGGAGTATAATATGTCCCAGATCATCTTACAAAATGTGCTTGATGGAGGAGCATCGGGCATGTTAGTAGTTGTGACTGGTGCAAGCCATGTAACATATGGTTCTAGAGGAACTGGAGTGCCAGCAAGAATTTCAGGAAAAATACAGAAGAAAAACCAAGTTGTAATATTGCTTGACCCTGAAAGACAGTTCATTCGTGGAGAGGGAGAAGTTCCTGTTGCTGATTTTTTGTGGTATTCTGCTGCCAGACCCTGTAATAGAAATTGCTTTGACCGTGCTGAGATTGCTCGGGTTATGAATGCTGCTGGGCGCAGACGAGATGCCCTTCCACAGGATCTACAAAAGGGAATTGATCTTGGTTTGGTATCACCAGAGGTATTGCAGAACTTCTTTGACATAGAGAAGTATCCCTTAATTTCAGAACTCACTCACCGTTTCCAGGGTTTCAGGGAAAGATTGTTGGCAGACCCCAAATTCTTGCATAGATTAGCCATAGAAGAAGCTATATCGATAACAACTACTCTAATAGCACAGTATGAAAAGCGGAAAGAAAATTTTTTCCAGGAACTAGACTATGTTATCACAGACACTGTCAGAGGATCAATTGTTGATTTTTTTACAGTGTGGCTTCCTGCACCAACTCTGTCATTCCTTTCATATGCTGATGAGGCAAATGCACCTGAAAACATTAATTCACTAATAGGTCTTCTGGGCTCCATCCCAGACAATGCATTTCAAAAGAATCCAGCAGGGATAAACTGGAATCTCAATCATAGAATTGCATCAGTTGTATTTGGTGGTTTAAAACTTGCCGGTGTTGGATTTATTTCAAGCATAGGTGCTGTGGCTTCATCAAACTCTCTATATGCAATTCGTAAATTACTTAATCCGGCTGTCGTTACTCAACAACAGATTGTGAGGTCACCAATACTCAAAACAGCAGTTGTTTATTCATTATTTCTTGGAATCTCGTCAAATCTCCGATACCAGGTAATTGCTGGGTTAGTGGAGCATCGCCTTTCTGAACAGTTTGCATCCCAAACCTTGTTTGTAAATATGGTATCGTTTGTCGCACGGACAGTCAATTCCTATTGGGGAACCCAGCAATGGATTGACATTGCCCGCGCTACTGGTCTGCAAGTTAGAAAGACAGAGTTACCTACATCAGATCCTCCAAATAATGCAGCAATTGTTTGCGGCGAAACAGAAGAAGCCAGCATTGATGAGATAAAAGAATAA 2235 0.4582 MKPNTQASSFATTKPPHVTFFRRSRAPVQLNDAVWTVKCHRINLSLRHSKTITITAAAKPENDGVAENSVGPTRRVVLAAPFLAAGASFLFSSATRADDKAVTAPSPVSAPPPAELKAAKVEEPKKKQKEEEAITSRIYDATAIGEPLAIGKDKGKVWEKLMNARVVYLGEAEQVPVRDDKELELEIVKNLQKRCIENEKHLSLALEAFPSNLQEPLSQFMDNKIDGETLKSYTMHWPPERWQEYEPLLNYCRENGIRLVACGTPLSILRTVQAEGIRGLSKADRKVYAPPAGSGFISGFTSISRKSSVDSILNPSVPFGPSSYLSAQARVVEEYNMSQIILQNVLDGGASGMLVVVTGASHVTYGSRGTGVPARISGKIQKKNQVVILLDPERQFIRGEGEVPVADFLWYSAARPCNRNCFDRAEIARVMNAAGRRRDALPQDLQKGIDLGLVSPEVLQNFFDIEKYPLISELTHRFQGFRERLLADPKFLHRLAIEEAISITTTLIAQYEKRKENFFQELDYVITDTVRGSIVDFFTVWLPAPTLSFLSYADEANAPENINSLIGLLGSIPDNAFQKNPAGINWNLNHRIASVVFGGLKLAGVGFISSIGAVASSNSLYAIRKLLNPAVVTQQQIVRSPILKTAVVYSLFLGISSNLRYQVIAGLVEHRLSEQFASQTLFVNMVSFVARTVNSYWGTQQWIDIARATGLQVRKTELPTSDPPNNAAIVCGETEEASIDEIKE 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01449 744 MobiDBLite consensus disorder prediction 102 129 - -
Aip10g01449 744 Gene3D - 123 415 - -
Aip10g01449 744 Pfam Haem-binding uptake, Tiki superfamily, ChaN 157 376 IPR007314 -
Aip10g01449 744 Pfam Protein RETICULATA-related 483 667 IPR021825 -
Aip10g01449 744 SUPERFAMILY EreA/ChaN-like 155 412 - -
Aip10g01449 744 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 36 743 - -
Aip10g01449 744 PANTHER PROTEIN RETICULATA-RELATED 5, CHLOROPLASTIC 36 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01449 Aip-Chr10 25289963 25294523 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01449 - - gmx:100810366 1136.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01449 10 25289963 25294523 Aip10g01449 10 25289963 25294523 ECH