LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip10g01359	ATGATTCTATGGCAAGTCATTGCTATTATTCTTGCTTTGAATTCGGTGTCTGGAAACCAGAAGCTGAGAAACGAGGTGGTGTTTGCGGAGCATGGAGCGGTGGCGACGGACGATCGGCGGTGTTCGAGGATCGGAAAGGACGTTCTGCGGGAAGGAGGGCACGCGGTGGATGCGGCGGTGGCGGCGGCTCTTTGTTTGGGGGTTGTGAGCCCGGCGTCAAGTGGACTGGGGGGTGGAGCATTTATGCTTCTGAGGTTGGCGGATGGGGTCGCAAAGGCCTTTGATATGAGAGAAACTGCTCCTCTTCATGCTTCCCAGGACATGTACGGTGGCAACACTACTTTGAAGGCAAAAGGTGGTCTCTCCGTGGCTGTTCCGGGAGAACTACCCGGCCTTCACGAGGCATGGAAACAACACGGGAGGCTTCCATGGAAACGACTCGTAAGGCCGGCCGAGATTCTTGCTCGCCGAGGATTCAAGATTTCGCCATACCTCAGGATGCAAATGGAACAAACAGAGTCAGGTATATTGCAAGATAAGGGTCTTCATAGCATATTTGCACCAAATGGAGAACTCTTGAAGATTGGTGAAGTATGTTACAATAAGAAACTGGCAGACACGCTTGGAGCTATTGCCATGTTTGGTCCACAAGCCTTCTATGGTGGATTGGTTGGCCATAATTTGGTTAAGGATGTTCAGAGTGTTGGAGGGATATTGACCATGGAAGACCTAAAAGGATATCAAGTTAAACAAACCAAACCAATAACAAATGATGTTCTTGGACTTGAGATTCTTGCCATGCCTCCTCCTTCAGGTGGGCCTCCAATGATGCTGCTGCTAAACATTCTAGCACAATATGAGCTCCCTTCAGGACTTTCTGGCTCCCTTGGGTACCATAGAGAAATTGAAGCTTTGAAACATGTTTTTGCTGTGAGAATGAATCTTGGAGACCCTGATTTTGTGAACATAACTGCTGTTCTTTCTGACATGCTTTCTCCTAAGTTTGCTGAAGTGCTAAAGAATGACATCAATGATAATAGAACTTTTGGTCCCGATCATTATGGTGGCAGGTGGAATCAGATCCATGATCATGGTACTAGTCATCTAAGCGTCATTGATCTTGATCGCAATGCAGTGTCCATGACTACCACTGTGAATGCATATTTTGGTTCAAAGATCCTTTCACCAAGCACAGGAATAGTACTAAACAATGAGATGGATGATTTTTCCATGCCTATGAAAAATGTCTCCAACGACGTTCCACCTCCTGCTCCGGCCAATTTCGTCGCGCCCGGAAAGCGGCCGTTATCGTCCATGAGTCCAACTATTGTCCTCAAGGATGGGAAATTGCAAGCTGCAGTAGGTGCTAGTGGAGGAGCCATGATCATAGCTGGAACATCAGAAGTTATTCTGAATCATTTTGTGAAAGGAATGGATCCTCTTTCTTCTGTAATGTCTCCAAGGGTCTATCATCAGCTTATACCTAATGTGGTCAATTATGAGAATTGGACAACTGTGAGTGGTGACCACTTTGAACTTCCTTCTGACATAAGGGCAGCCCTTATAAGTAAGGGTCATGTCCTAAAGGGCCTTGCAGGTGGTACAATTTGCCAACTTGTAGTTCAAGACATTGATCCTTCAATGGGGAATAATAAAGACATTGATCCTTCAATGGGGAATAATAAAGAAAGTGGAAAGCTTGTGGCTGTGAGTGACCCAAGAAAGGGTGGTTTACCTTCAGGCTTCTGA	1749	0.4631	MILWQVIAIILALNSVSGNQKLRNEVVFAEHGAVATDDRRCSRIGKDVLREGGHAVDAAVAAALCLGVVSPASSGLGGGAFMLLRLADGVAKAFDMRETAPLHASQDMYGGNTTLKAKGGLSVAVPGELPGLHEAWKQHGRLPWKRLVRPAEILARRGFKISPYLRMQMEQTESGILQDKGLHSIFAPNGELLKIGEVCYNKKLADTLGAIAMFGPQAFYGGLVGHNLVKDVQSVGGILTMEDLKGYQVKQTKPITNDVLGLEILAMPPPSGGPPMMLLLNILAQYELPSGLSGSLGYHREIEALKHVFAVRMNLGDPDFVNITAVLSDMLSPKFAEVLKNDINDNRTFGPDHYGGRWNQIHDHGTSHLSVIDLDRNAVSMTTTVNAYFGSKILSPSTGIVLNNEMDDFSMPMKNVSNDVPPPAPANFVAPGKRPLSSMSPTIVLKDGKLQAAVGASGGAMIIAGTSEVILNHFVKGMDPLSSVMSPRVYHQLIPNVVNYENWTTVSGDHFELPSDIRAALISKGHVLKGLAGGTICQLVVQDIDPSMGNNKDIDPSMGNNKESGKLVAVSDPRKGGLPSGF	582

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip10g01359	582	Gene3D	-	254	358	IPR043138	-
	Aip10g01359	582	PRINTS	Gamma-glutamyltranspeptidase signature	366	384	-	-
	Aip10g01359	582	PRINTS	Gamma-glutamyltranspeptidase signature	455	472	-	-
	Aip10g01359	582	PRINTS	Gamma-glutamyltranspeptidase signature	140	159	-	-
	Aip10g01359	582	PRINTS	Gamma-glutamyltranspeptidase signature	431	446	-	-
	Aip10g01359	582	PRINTS	Gamma-glutamyltranspeptidase signature	267	286	-	-
	Aip10g01359	582	PRINTS	Gamma-glutamyltranspeptidase signature	54	79	-	-
	Aip10g01359	582	PRINTS	Gamma-glutamyltranspeptidase signature	122	140	-	-
	Aip10g01359	582	PRINTS	Gamma-glutamyltranspeptidase signature	390	408	-	-
	Aip10g01359	582	PRINTS	Gamma-glutamyltranspeptidase signature	238	254	-	-
	Aip10g01359	582	MobiDBLite	consensus disorder prediction	548	582	-	-
	Aip10g01359	582	PANTHER	GLUTATHIONE HYDROLASE 1-RELATED	3	580	-	-
	Aip10g01359	582	PANTHER	GAMMA GLUTAMYL TRANSPEPTIDASE	3	580	IPR000101	GO:0006751\|GO:0036374
	Aip10g01359	582	Gene3D	-	361	582	IPR043137	-
	Aip10g01359	582	TIGRFAM	g_glut_trans: gamma-glutamyltransferase	34	505	IPR000101	GO:0006751\|GO:0036374
	Aip10g01359	582	Pfam	Gamma-glutamyltranspeptidase	47	577	-	-
	Aip10g01359	582	SUPERFAMILY	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	24	582	IPR029055	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip10g01359	Aip-Chr10	22589411	22596296	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip10g01359	6	582	Miscellaneous Gene Families	AT4G39640	64.249	0.0	746

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip10g01359	K18592		-	gmx:100797040	885.945