Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01333 ATGCGGACACGGTCGGTAGTTGCTATTCTGTTACTCTCCTCGTTATTGCTGATGCTCTCTCCAACGGCTTTCCCAATGCCGTTGCAACCGTCCACCTTCTCGGCCAAGCTGATTCACCGCTTCTCCCGAGAACTGAACCTGGTTCGCCACCGGCCCGGTTCGGTTCCGGACCGGCGAACCATTCTCTATTACCAGATGCTTCTACAAAGTGATAAGATCAGGCTCGGCGCTCGCCAGCTCCTCTTTCCTTCTCGCGGTGCCAAAACGATGGCACCCGGCAACGACTTCGGCTGGTTGCATTACACTTGGATTGATATAGGGACACCGAGTATTTCGTTTTTAGTGGCATTGGATGCTGGGAGTGATCTGTTATGGGTTCCATGTGATTGCATACAGTGCGCTCCCTTGTCTGCCAGTTACTATGCCCCTCTGGATAGAGATCTGAATGAGTATAGTCCTTCTCGTTCAAGATCCAGCAAGCCTCTGTCTTGCAGCCATCAGTTATGTGATCCGGGTTCAAACTGTAAGAGTTCCAAGCAGCAGTGTCCATACACAATCAATTACGTATCAGAAAATACATCGAGTTCTGGATTGTTGGTTGAGGACATATTGCATCTTCAATCAGGAGGTGGCGGTAGTGCTGGCGGATCTAACACTTCTGTTCAGGCTTCGGTTGTTATCGGGTGTGGTATGAAGCAGAGTGGCGGGTATTTAGATGGGATAGCTCCGGATGGCCTCATGGGTTTGGGACCTGGGGAGAGTTCAGTTCCAAGTATTCTTGCAAAATCAGGACTAATCCATGATTCTTTTTCCTTATGTTTTAATGCTGATGGTTCTGGTCGCATGTTTTTTGGGGACCAGGGATCATCCATCCAACAACAGTCTACTTCATTCTTGCCATTCAATGGAATATATTCAACATACATTATTGGAGTGGAGACATGTTGTATTGGGAATTCTTGTCTCAAAATGACAAGTTTTAAAGCACAGGTTGATAGTGGAACATCATTTACATTTCTTCCTGGGCATGTGTATGAATCCATAGCAGAGGAGTTTGATAAAAAGGTAAATGCTTCAAGAGCTACTTTCAAAGATACTCCCTGGGAGTATTGTTATGCTTCCAGTTCACAAGACTTGCCAAAGATTCCCACCTTAACACTCATGTTCCAGCAGAATAACAGCTTTGTGGTCTATAATCCTGTGTTTGTATTCAATGTCAATCAGAAAACAACTGCATTTTGTTTAGCCATAGAGCCAGCTGAAGGGGATATGGGAACAATAGGACAGAACTTCATGACGGGATATCGGTTGGTATTTGATCAAGAAAACAAGAAGTTAGCATGGTCACGGTCAAATTGTAAGGATCTCAATCTAGGTAAGGCAATGCCCCTTTCGCCTCCAAACGAGACAGCCTCGAACCCATTACCGGCAGATGAGCAGCAGAGAACTAAGGGGAATGCGGTTGCCCCAGCTGTTGCCGGAACAGCTCCTCGCAAACCTTCTGGTGCTACGTCTTTGACGATCTCATGCCGGCATCATTGGCACTGTTATTTGTTTCTGCTATTCCAACTTCTAGTAGCCTTCTTATGA 1590 0.4623 MRTRSVVAILLLSSLLLMLSPTAFPMPLQPSTFSAKLIHRFSRELNLVRHRPGSVPDRRTILYYQMLLQSDKIRLGARQLLFPSRGAKTMAPGNDFGWLHYTWIDIGTPSISFLVALDAGSDLLWVPCDCIQCAPLSASYYAPLDRDLNEYSPSRSRSSKPLSCSHQLCDPGSNCKSSKQQCPYTINYVSENTSSSGLLVEDILHLQSGGGGSAGGSNTSVQASVVIGCGMKQSGGYLDGIAPDGLMGLGPGESSVPSILAKSGLIHDSFSLCFNADGSGRMFFGDQGSSIQQQSTSFLPFNGIYSTYIIGVETCCIGNSCLKMTSFKAQVDSGTSFTFLPGHVYESIAEEFDKKVNASRATFKDTPWEYCYASSSQDLPKIPTLTLMFQQNNSFVVYNPVFVFNVNQKTTAFCLAIEPAEGDMGTIGQNFMTGYRLVFDQENKKLAWSRSNCKDLNLGKAMPLSPPNETASNPLPADEQQRTKGNAVAPAVAGTAPRKPSGATSLTISCRHHWHCYLFLLFQLLVAFL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01333 529 Gene3D Acid Proteases 89 286 IPR021109 -
Aip10g01333 529 PANTHER ASPARTYL PROTEASES 16 470 IPR001461 GO:0004190|GO:0006508
Aip10g01333 529 PRINTS Pepsin (A1) aspartic protease family signature 106 126 IPR001461 GO:0004190|GO:0006508
Aip10g01333 529 PRINTS Pepsin (A1) aspartic protease family signature 329 340 IPR001461 GO:0004190|GO:0006508
Aip10g01333 529 PRINTS Pepsin (A1) aspartic protease family signature 425 440 IPR001461 GO:0004190|GO:0006508
Aip10g01333 529 MobiDBLite consensus disorder prediction 466 480 - -
Aip10g01333 529 Gene3D Acid Proteases 288 455 IPR021109 -
Aip10g01333 529 SUPERFAMILY Acid proteases 96 454 IPR021109 -
Aip10g01333 529 Pfam Xylanase inhibitor N-terminal 101 286 IPR032861 -
Aip10g01333 529 PANTHER ASPARTIC PROTEINASE-LIKE PROTEIN 1 16 470 - -
Aip10g01333 529 Pfam Xylanase inhibitor C-terminal 327 449 IPR032799 -
Aip10g01333 529 MobiDBLite consensus disorder prediction 463 500 - -
Aip10g01333 529 ProSiteProfiles Peptidase family A1 domain profile. 100 449 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01333 Aip-Chr10 21679338 21683368 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01333 93 456 Miscellaneous Gene Families AT1G44130 25.840 1.02e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01333 - - gmx:100782209 761.525