Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01330 ATGGAATCATCGTCTCCGATTTGCGAATCCCAAACGGACCCTCTCTCAACCCCTTCCTTCTCCTCTCTCAACGATCTCTGTCATGACCTTACCTCCCTACAAGACCTCGCCACTCGCGGCGCGTGGCGCTCCGTCATCGACAAGGTCTCACGCGCCAGGGCCCTCAACCTCCTTCAAAACCCTCACGACCATCTCACCTACCTTGCCTATAATGCCCTTGCCTTCGCTAAACTGCGTCGTTTCAACGAAGCCTCCGCAGAGCTTGATTCCATGGAGGACCTCGATAGCCACCACTACCGCTACGAAACCTATCCCAAAATCTATCATAACCGAACCGGTTCCATGGTCCCCTTCTCCCTTCGCTGGCTCCACGCTCTTCTTCCCATCAAATTAGGGCACAGAAATCAAGGTGTGGATCGCCTTTACACTCTTCTCGATTTTGTTCGCCAGAAGATCAGGGACAAGGAGACGAACAATCTGCAAGATTCGGTTCAGATCTGGAAGAAGAGAGAGGTATTCGTTGTGAATTGCATAATTGGGAACCATTTGAGTCACAAGGAGTTCACCGTGTGCTTGAGCTTGTTGAAGGAGCTGCTTTCGCGTGACTCTTTGGATCCATTGCTGGTTTCCCAGCTTGGCTATGTTCAGTTGCAGATTGGGGACTTGGAAGGTGCAAAGGTTTCGTTCTCCAAGGTTGAGGGTTTGGTAGAGGAAGCAAAGATGGGTAATAACAATGGTTCGTTGTTGTTGAGTGAGATTGAGATGATGAACCTTGTGAATAGAAACAAGGCTTTGGTGTATTTGGTTGGGAAGGATTATGTCTCCGCTGTTAGAGAGTATGAGGAGTGCATTGAGAGGGATGGTTCTGATGTTGTTGCCTTGAACAACAAGGCATTGTGTTTGATGTATCTGAGGGATTTGTCTGATTCCATCAAGGTACTTGAGAATGCACTTGAGACGGTTCCCACCGTGGCACTCAATGAGACGCTTGTTGTTAACTTGTGTAGCATGTATGAGCTGGCCTATGTGAATCACTCGGATATTAAGAGGACACTGAGCAATTGGATCGCTCGTGTCGCCCCCGACGACTTTGATGCAACTTGCACTCGGACATGA 1116 0.4901 MESSSPICESQTDPLSTPSFSSLNDLCHDLTSLQDLATRGAWRSVIDKVSRARALNLLQNPHDHLTYLAYNALAFAKLRRFNEASAELDSMEDLDSHHYRYETYPKIYHNRTGSMVPFSLRWLHALLPIKLGHRNQGVDRLYTLLDFVRQKIRDKETNNLQDSVQIWKKREVFVVNCIIGNHLSHKEFTVCLSLLKELLSRDSLDPLLVSQLGYVQLQIGDLEGAKVSFSKVEGLVEEAKMGNNNGSLLLSEIEMMNLVNRNKALVYLVGKDYVSAVREYEECIERDGSDVVALNNKALCLMYLRDLSDSIKVLENALETVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSNWIARVAPDDFDATCTRT 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01330 371 SUPERFAMILY TPR-like 195 326 IPR011990 GO:0005515
Aip10g01330 371 Gene3D Tetratricopeptide repeat domain 174 353 IPR011990 GO:0005515
Aip10g01330 371 PANTHER D-ALANYL-D-ALANINE CARBOXYPEPTIDASE 14 370 - -
Aip10g01330 371 SMART tpr_5 257 290 IPR019734 GO:0005515
Aip10g01330 371 SMART tpr_5 291 324 IPR019734 GO:0005515
Aip10g01330 371 SMART tpr_5 206 239 IPR019734 GO:0005515
Aip10g01330 371 PANTHER F-BOX DOMAIN, TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN PROTEIN-RELATED 14 370 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01330 K20309 - gmx:100779691 575.474