Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01237 ATGCTTCATTTGAATTTTGCCACCGTTCAGGGCTCTCCAGATTTGAAATTTGCAAAAGAGGTAGCAGATTATCTTGGTACTCGACATTATGAACTTTATTTCACAGTTCAGGAAGGTATAGATGCACTTGAGGAAGTCATTTACCACATTGAAACATATGATGAAGAGTTTCATGAAGAAACATGTCGAAAAATCAAAACTCTTCATCTTTATGACTGCCTGAGAGCCAATAAATCAACTTCAGCATGGGGTATAGAGGCACGTGTACCATTCTTGGATAAAGAATTTATCAACACAGCCATGAGTATTGATCCAGAGTGGAAAATGATACGACCTGATCTCGGAAGGATAGAGAAGTGGGTATTGCACAATGCATTTGATGACGAAACAAATCCATATTTACCAAAGCACATTTTGTACAGGCAGAAGGAACAGTTAAGTGAGGGTGTAGGGTACAGCTGGATTGATGGCTTGAAGGAGCATGCTAACCAACAAAGTTCCATTGATGCCATCCCATGGTTTCTGCTCTTTTTCACTTTACAAACTGACAGGTCACAGATGGAATGCTGTTGCATGCTAACTATGTACCCTGAAAACACTCACACAACAAAAGAAGCATACCTCTACAGGACAATTTTTGAGAAGCACTTTCCAAAGAATGCCGCAAGATCAACCGTTCCAGGAGGTCCTAGTGTAGCGTGCAGCACCGCAAAAGCTGTGGAATGGGATGCCGAATGGTCAAAGAATCCTGACCCTTCTGGCCGTGCTGCTCTTGGTGTTCATGCAGCGGCATATGAGGCTGCAGCAGATGCAAAAACAGCCTAG 825 0.4267 MLHLNFATVQGSPDLKFAKEVADYLGTRHYELYFTVQEGIDALEEVIYHIETYDEEFHEETCRKIKTLHLYDCLRANKSTSAWGIEARVPFLDKEFINTAMSIDPEWKMIRPDLGRIEKWVLHNAFDDETNPYLPKHILYRQKEQLSEGVGYSWIDGLKEHANQQSSIDAIPWFLLFFTLQTDRSQMECCCMLTMYPENTHTTKEAYLYRTIFEKHFPKNAARSTVPGGPSVACSTAKAVEWDAEWSKNPDPSGRAALGVHAAAYEAAADAKTA 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01237 274 Pfam Asparagine synthase 54 222 IPR001962 GO:0004066|GO:0006529
Aip10g01237 274 Pfam Asparagine synthase 6 52 IPR001962 GO:0004066|GO:0006529
Aip10g01237 274 Gene3D HUPs 2 55 IPR014729 -
Aip10g01237 274 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 3 55 268 - -
Aip10g01237 274 Gene3D HUPs 56 225 IPR014729 -
Aip10g01237 274 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 10 172 - -
Aip10g01237 274 CDD Asn_Synthase_B_C 11 149 IPR001962 GO:0004066|GO:0006529
Aip10g01237 274 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 3 2 54 - -
Aip10g01237 274 PANTHER ASPARAGINE SYNTHETASE 2 54 - -
Aip10g01237 274 PANTHER ASPARAGINE SYNTHETASE 55 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01237 Aip-Chr10 18734328 18736374 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01237 K01953 - gmx:732660 383.645