Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01172 ATGGCCTTCTCAATAGGTGCTACTACTACGAGTAGCAGAAGCATGAACAATGGCGTGACCACAGTGGATTGCCACAAACAAGTTCGATCATGGAGGCTCCTACGTTACCTGGTGGCACTCCTTATCCCAACATGTAACTGCATTGAACAAAAAGAAGAAAAGTTTGAGCACAAGAAAATCATGAGCAACATCACAGGCACAATTTTCGGTTACCGGAAGGGGAAGGTAAGTTTCTGCATCCAATCGAAGTCGAACTCATCGGAACCGATTCTCCTTCTTGAATTGGCGGTTCCAACGACGATCTTGGCGAAGGAAATGCGAGGAGGAACGCTGAGAATAGTTCTTGAGAGTAGTTGCAGTTATAACAAGAATCTGTTTTCGACGCCGCTTTGGACGATGTATTGCAATGGAAGGAAAGTTGGTTACGCCGTTAATCGAAGACCGTTGAATTCTGATATGGAAGCGTTAAGGTTGATGCGTTCTGTTTCAGTTGGAACTGGCGTTATAAATAATGAACAAGATAATGAGCTTATGTATCTAAGAGCATCGTTTCAAAGGGTTCGTGGAACTTCAAATTCTGAATCTTTTCATTTGATTGATCCAGAGGGGTGCATTGGACAGGAGCTAAGTATCTTCTTTTTTCGCTCACCCACATGA 657 0.4338 MAFSIGATTTSSRSMNNGVTTVDCHKQVRSWRLLRYLVALLIPTCNCIEQKEEKFEHKKIMSNITGTIFGYRKGKVSFCIQSKSNSSEPILLLELAVPTTILAKEMRGGTLRIVLESSCSYNKNLFSTPLWTMYCNGRKVGYAVNRRPLNSDMEALRLMRSVSVGTGVINNEQDNELMYLRASFQRVRGTSNSESFHLIDPEGCIGQELSIFFFRSPT 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01172 218 Pfam Protein of unknown function, DUF617 64 215 IPR006460 GO:0010274
Aip10g01172 218 PANTHER DUF617 FAMILY PROTEIN 15 50 - -
Aip10g01172 218 PANTHER DUF617 FAMILY PROTEIN 62 216 - -
Aip10g01172 218 PANTHER - 62 216 - -
Aip10g01172 218 PANTHER - 15 50 - -
Aip10g01172 218 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 64 216 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01172 Aip-Chr10 17105423 17106079 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01172 - - gmx:100805400 291.197