Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01157 ATGCAGACACTTGCCTTTGTTGTAGTCGGACTTCTTCTTCTTCCTATTCTTCGACGCAGAAGAGGAGCCACCACAAACACTTATACAAGGCTAGACCTCCTTCGGCCCTCGCGCCACCTCTTCNNNNNNNACCACCACCTTCCCGACGACGACGAGGAACGCGACCGCCACTCCCTTAAGGACCGGTATCGTCCCCTACAGTATCTCTCTTCCTTCTTCGGCGATGACCCTAGGGTTCCCAATCCTCTCCATTCCCCAAGGATCTCATTCTTCTGCACCTTGCTTCTAATCCTCGTTGGCCTTCTCTCCCTCTTCTCAATCGTCAACAAATTGAATGCTCCTTACCTGTGTAAAAAGGATGGGATTACACTTCACTGCCCTCACGTGAAAGAATCGCCGTCTCTGTGGGAAAATCCTTTATCGTCCACGACGTCTTGGAAGCCTTGTGCTGAGCGCAGGGATGGTGTTATAGAAGAGCTTCCTCCTGAAAATGAAACAAATGGGTACATATTCATCCATGCTGAAGGTGGTCTAAACCAACAAAGAATTGCGATATGCAATGCCGTGGCTGTGGCCAAAATAATGAATGCCACACTTATTTTGCCTGTTTTGAAGCAAGACCAGATTTGGAAAGACCAAACGAAATTTGAAGACATTTTTGATGTGGATCACTTCATAGATTACCTGAAATATGATGTTCGTATAGTCCGTGATATCCCAGAATGGTTTACTGATAAGACAGAGCTATTCAGTAGTATAAGGAGGACTGTAAAGAACATTCCAAAATATGCGCCTGCACAATTTTACATTGACAATGTTTTGCCTCGAGTCAAGGAGAAAAGGATTATGGCTCTAAAACCTTTTGTTGATAGGCTGGGATATGACAATGTTCCTCCAGAAATCAACAAGTTGAGATGTAGGGTTAATTATCATGCTCTGAAATTTCTTCCTGATATAGAGCAAATGGCTGATTTACTGGCATCAAGGATGAGAAACCGAACTGGTAGTTCAAATCCTTATATGGCTCTGCATCTTCGATTTGAGAAAGGAATGGTGGGCCTATCGTTCTGTGATTTTGTGGGGACAAGAGAAGAGAAAGCTAAAATGGCAGAATACAGGCAAAAGGAGTGGCCTCGACGGTATAAGAATGGTTCCCACTTATGGCAATTGGCTCTACAGAAGCGAAAGGAGGGACGGTGTCCTCTAGAGCCTGGAGAAGTGGCCGTTATACTTCGTGCTATGGGCTATCCAAAGGAAACACAAATTTATGTCGCTTCTGGACAAGTTTATGGTGGACAGAATCGGATGGCTCCGCTGAGGAATATGTTCCCTAATCTGGTTACAAAGGAGGAGTTGGCAACTAAAGAGGAGTTGGATGGTTTTAGAAAGCATGTGACGAGCCTTGCAGCTCTTGACTTCCTGGTATGCCTGAAGTCAGATGTGTTTGTGATGACCCATGGAGGCAACTTTGCTAAGCTGATCATTGGCGCCCGTAGATACATGGGTCACCGTCTAAAATCAATCAAGCCTGACAAAGGATTAATGTCCAAGTCTTTTGGGGATCCATACATGGGTTGGGCTACTTTTGTTGAAGATGTGGTTGTTACTCATCAAACGCGGACAGGATTGCCGGAAGAAACTTTCCCCAACTATGACCTCTGGGAGAACCCCTTGACTCCTTGCATGTGCAAAGCCTGA 1698 0.4523 MQTLAFVVVGLLLLPILRRRRGATTNTYTRLDLLRPSRHLFXXXHHLPDDDEERDRHSLKDRYRPLQYLSSFFGDDPRVPNPLHSPRISFFCTLLLILVGLLSLFSIVNKLNAPYLCKKDGITLHCPHVKESPSLWENPLSSTTSWKPCAERRDGVIEELPPENETNGYIFIHAEGGLNQQRIAICNAVAVAKIMNATLILPVLKQDQIWKDQTKFEDIFDVDHFIDYLKYDVRIVRDIPEWFTDKTELFSSIRRTVKNIPKYAPAQFYIDNVLPRVKEKRIMALKPFVDRLGYDNVPPEINKLRCRVNYHALKFLPDIEQMADLLASRMRNRTGSSNPYMALHLRFEKGMVGLSFCDFVGTREEKAKMAEYRQKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYPKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKEELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWATFVEDVVVTHQTRTGLPEETFPNYDLWENPLTPCMCKA 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01157 565 PIRSF UCP009360 52 565 IPR024709 -
Aip10g01157 565 CDD O-FucT_plant 169 504 IPR024709 -
Aip10g01157 565 Pfam GDP-fucose protein O-fucosyltransferase 169 501 IPR019378 -
Aip10g01157 565 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 59 565 - -
Aip10g01157 565 PANTHER PROTEIN PECTIC ARABINOGALACTAN SYNTHESIS-RELATED 59 565 - -
Aip10g01157 565 Gene3D - 311 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01157 Aip-Chr10 16558876 16567925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01157 135 564 Miscellaneous Gene Families AT1G22460 35.698 1.36e-93 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01157 - - gmx:100809112 974.156