Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01130 ATGAATCCTTTGTGCTGCATTGCTCCGGTTTCGATCGATCGGGACAGGGCGAATCCCGTAGCTACGAAATCGCCAACTCACTGCCAGCTAGGGCTCGATGCGTCGGTCAGGACGGTGAACGGCGGCTCCAAATCGAGCTCCTCTGCGCCGGATTCCTCTCATGGCGGTGGCGATTCTCTGAAGTCGTCTTCCGGCGGGAACCGCGGCGAAGAGGAGGATTTGTCAACGACGACGGCGGAGCCCCGGGAGTCGAAGGTGTTCGGTGGCGGGAACGGAGTGGCCGGAAGCGTGGCCGGAATCTTGTACAAGTGGGTGAACTACGGGAAAGGGTGGAGGTCGAGGTGGTTCGTGCTGGAGGATGGAGTGCTTTCGTACTACAAGATTCATGGTCCGGATAAGATCGTGGTGAGCCCAGCGAGGGACCGGAGCGTGAGGGTGATCGGCGAGGAGTCATCGAAGTTCGTGAAGAAGAACAATTGGAGCCTGAATCGAGTAGCAGGAGTTAGTGGTGGCAACTCTACTAAGCAATGCAAGCCCTTCGGTGAGATACACTTGAAGGTTTCTTCGGTTCGGGCTAGCAAATCTGATGATAAGCGGCTATCCATATTTACCGGGACAAAAACTCTACACTTGAGGTGTGTATCTAGAGAAGACAGAGCTATGTGGATTGAGGCCCTGCAGTCCACGAAAGATCTTTTTCCTAGAGCTCTAACAAGTAGTGATCTTGCAACTCCAGAAGATATTGTAGTTTCGACTGAGAAGCTGCGATCTCGATTGTCAGAGGAAGGTATAAGTGAGGCAGTTATTAATGACTGCGAGTCTATTATGCTCTCCGAAGTCTCTTATCTTCAAGGCAAATTGAAGTTTCTTCAGCAGAAACATGTAATGTTGCTGGACACCTTAAAACAACTAGAGACAGAGAAAATAGAGTTGGAAACTACTGTAGTGGATGAAACAAAGGAGCGTGAATCATATTGTGGACAAGGGAACAGAAGATTTAGTGATTTCTATTCTGTCATGTCGGAGGGCAGTGCTACTGATTCAGTAGCTGATAATGAAAGTCAAGACGGAGCAGATGTTGAAACTGATGATGATGATGGTGCATTTTTTGACACAAATGAGTTTTTGTGTTCAGATGCCTTAAGAAGTGCTTCTTATCGAAGTAGGGAGGGTATGACAAATGCAAGCATACATGATAGAGATTGTTTACTTTCTGATGGTTTGCATGGGTTTGAGAAGGGAATCAAAGATGTAAGCTATCCATATGTCAGAAGAAGGGATAACTTACCAGAGCCAAAAGAAAAAGAGAGGCCTGTTGGCTTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCAGGAGTTTGTCTCCCTGTGTATAGGGCATTGGAATGGGGAAAGCAGGAGAATGATTTGATGAGAATCCTAAATGTTGCAGCTTTTGCTGTGTCCGGCTATGCATCCACTGAAGGTCGGCAGTGCAAACCTTTCAATCCTCTACTTGGGGAGACATATGAAGCTGACTATCCAGATAAAGGTCTGAGATTCTTCTCTGAAAAGGTTAGTCATCATCCCATGGTTGTTGCTTGTCACTGTGAGGGAAGAGGATGGAAGTTCTGGGCGGACTCTAACTTGAAAGGGAAATTCTGGGGGCGTTCTATTCAGTTAGATCCTGTGGGTGTCCTCACCCTACAGTTTGAGGATGGTGAAACATTTCAGTGGAGCAAGGTCACCACTTCAATTTACAATATCATACTAGGTAAAATTTATTGTGATCACTATGGTACAATGCGCATCAAGGGCAGTGGCAACTACTCTTGCAAACTGAAGTTCAAAGAGCAATCTATCATAGATCGAAACCCACACCAGGTCCATGGATTTGTTCAAGACAACAGAACCGGAGAGAAGGTAGCAATGTTGATTGGGAAATGGGACGAAGCAATGTACTATGTCCTTGGGGACCCAACTACAAAGCCAAAAGGTTATGATCCAATGACAGAAGCTGCATTATTGTGGGAAAGGGACAACTGCAGCACCAAGACAAGATACAACCTCTCTCCTTTTGCAATATCATTGAATGAAATAATGCCCGGCATGATAGAGAAGTTACCTCCCACTGACTCAAGGTTGAGACCCGATCAAAGACATTTAGAAAATGGAGAATATGAGTTGGCGAATGCAGAGAAATTAAGACTAGAACAGTTGCAGAGACAGGCAAGAAAGATGCAGGAAAGAGGATGGCAGCCTAGATGGTTTCAGAAGAATGAGGATGGGTCTTACCGATACAAGGGTGGCTATTGGGAAGCAAGAGAAAAGCATAGTTGGGATGGAATCCCTGATATATTTGGACAGAGTTGTGATTTACCTTCATGTTCTGAAGATACAATCATTACTCTGTCCTAA 2406 0.458 MNPLCCIAPVSIDRDRANPVATKSPTHCQLGLDASVRTVNGGSKSSSSAPDSSHGGGDSLKSSSGGNRGEEEDLSTTTAEPRESKVFGGGNGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKIVVSPARDRSVRVIGEESSKFVKKNNWSLNRVAGVSGGNSTKQCKPFGEIHLKVSSVRASKSDDKRLSIFTGTKTLHLRCVSREDRAMWIEALQSTKDLFPRALTSSDLATPEDIVVSTEKLRSRLSEEGISEAVINDCESIMLSEVSYLQGKLKFLQQKHVMLLDTLKQLETEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSATDSVADNESQDGADVETDDDDGAFFDTNEFLCSDALRSASYRSREGMTNASIHDRDCLLSDGLHGFEKGIKDVSYPYVRRRDNLPEPKEKERPVGLWSIIKDNIGKDLSGVCLPVYRALEWGKQENDLMRILNVAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMVVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMRIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAALLWERDNCSTKTRYNLSPFAISLNEIMPGMIEKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARKMQERGWQPRWFQKNEDGSYRYKGGYWEAREKHSWDGIPDIFGQSCDLPSCSEDTIITLS 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01130 801 MobiDBLite consensus disorder prediction 344 364 - -
Aip10g01130 801 Pfam Oxysterol-binding protein 469 772 IPR000648 GO:0008289
Aip10g01130 801 SUPERFAMILY PH domain-like 16 228 - -
Aip10g01130 801 MobiDBLite consensus disorder prediction 39 64 - -
Aip10g01130 801 MobiDBLite consensus disorder prediction 65 79 - -
Aip10g01130 801 Gene3D - 94 233 IPR011993 -
Aip10g01130 801 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 461 IPR000648 GO:0008289
Aip10g01130 801 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 460 788 IPR000648 GO:0008289
Aip10g01130 801 Pfam Pleckstrin homology domain 99 228 - -
Aip10g01130 801 Coils Coil 287 321 - -
Aip10g01130 801 ProSiteProfiles PH domain profile. 94 231 IPR001849 -
Aip10g01130 801 Gene3D - 715 779 - -
Aip10g01130 801 CDD PH_ORP_plant 97 235 - -
Aip10g01130 801 SMART PH_update 95 233 IPR001849 -
Aip10g01130 801 Gene3D - 504 671 - -
Aip10g01130 801 SUPERFAMILY Oxysterol-binding protein-like 436 785 IPR037239 -
Aip10g01130 801 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D 460 788 - -
Aip10g01130 801 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D 2 461 - -
Aip10g01130 801 Coils Coil 726 746 - -
Aip10g01130 801 MobiDBLite consensus disorder prediction 39 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01130 Aip-Chr10 15803558 15809670 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01130 K20456 - gmx:100788779 1386.32