Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01114 ATGGCAGCAACAATAGCAACAATGGCCATGGTTAATGCAAAGTGCCTTAACACAAACTCACCCAAGTTTCCAAAGCCCACACCTTCTTCTTCAAGGCCCACTTTTTCCCTCCTTTCCCTTGAGAATCTCCCAAAGGGAATTGCCACCACAAAAAGCTCCAATCCCGTCAACCTTTCAACTTCCATGGCAGGAACTGCCATAGCTGGTGCTATCTTCTCCACCCTTGGAGCCTCCGACGCCGCCTTCGCCGCACAGCAAATCGCCGACATAGCAGACGGCGACAACCGTGGGCTTGCACTGTTGCTGCCCATAATTCCGGCAATTGCATGGGTTCTTTTCAACATCCTGCAGCCAGCACTTAACCAACTGAACCGCATGAGGAGCAGCAAAGGGGTCATTGTTGGGCTTGGGCTTGGGCTTGGTGGGCTTTCAGCATCAGGGATTTTGTGGACACCCGAGGCATCAGCGGCAGTTAGCAATGATTTGGGAATGATTGCTGCTGATGCTGCGAGTGACAACAGGGGTCAGCTTCTGCTGTTTGTTGTGGCACCTGCAATTCTTTGGGTTCTTTACAATATCTTGCAGCCTGCTTTGAACCAACTCAACAGGATGAGATCTCAGTGA 624 0.5112 MAATIATMAMVNAKCLNTNSPKFPKPTPSSSRPTFSLLSLENLPKGIATTKSSNPVNLSTSMAGTAIAGAIFSTLGASDAAFAAQQIADIADGDNRGLALLLPIIPAIAWVLFNILQPALNQLNRMRSSKGVIVGLGLGLGGLSASGILWTPEASAAVSNDLGMIAADAASDNRGQLLLFVVAPAILWVLYNILQPALNQLNRMRSQ 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01114 207 Hamap Photosystem II protein Y [psbY]. 94 128 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Aip10g01114 207 Pfam Photosystem II protein Y (PsbY) 94 126 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Aip10g01114 207 Pfam Photosystem II protein Y (PsbY) 172 204 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Aip10g01114 207 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 207 - -
Aip10g01114 207 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 207 IPR038760 GO:0009523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01114 K02723 - vvi:100252545 242.662