Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01100 ATGGCTACGAAGAATGGTAATAATAATCATCAGCATTATGATGAGCAAGAAGGAAAGCCTCTTCCAAAGTTTGGTGAATGGGATGTGAATGATCCAGCTTCTGCAGAAGGATTCACTGTTATATTCAATAAGGCCAGAGATGAGAAAAAAACTGGTGGAGCTTCTGGAAGACACAATTCCAGAAGATTCGATTCCAAATCAAAGCGCAAACAGGATCAACAAAAGAGTGGCCTGAAAAAGTGGTTCTGCTTTGGACCTTAA 261 0.4023 MATKNGNNNHQHYDEQEGKPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGASGRHNSRRFDSKSKRKQDQQKSGLKKWFCFGP 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01100 86 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 15 83 IPR040387 -
Aip10g01100 86 MobiDBLite consensus disorder prediction 1 30 - -
Aip10g01100 86 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 16 51 IPR008700 -
Aip10g01100 86 PANTHER PROTEIN NOI4 15 83 - -
Aip10g01100 86 MobiDBLite consensus disorder prediction 42 86 - -
Aip10g01100 86 MobiDBLite consensus disorder prediction 42 76 - -
Aip10g01100 86 MobiDBLite consensus disorder prediction 10 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01100 Aip-Chr10 15124230 15126875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01100 - - gmx:102669045 111.694