Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01026 ATGATGATGTTGGTGAATTCTGGATCGATACGGAAACAGGTTTTTCCGATTGATTATGAGAGAGAAGTGTCGCAGAGGCTGGTTGATGCTGTTCATTACGGAAAAAACGACACTGCGTTGGAGCTAATGGCGGATCTCTACGTGGACGTGAACTTCGTGGGAACGGTGTCGTTTAAGTCCAAAACGACGGAGATCGTGCTGAACGATGAGTCGGCTCACCGAGTTAAATCGGTGTACGAGGAGTTCAAGACGGAGGTTACTGCTCTGTTCCTTGCCGCGCATTCTAACAACTTGACTCTACTCAGAAAGCTTTTGAGTGTCGGAGGCGACATAAACACGAGAGTGTTTCGCGGGTATGCGACGACGGCGACGGTGAGGGAAGGGCATCTAAAAGTGTTGGAGGTGCTCATCAATGGCGGGGCATCACAGCATGCATGTGAGGAGGCTTTGATGGAAACAAGCTACATGGGACGTGCCAGGTTTAGTGAGCTTCTCATGCAGAAACACATGATTCGTCCTCATGTTGCTGTTCATGCTCTTGTCTCTGCTTCTTCCAGAGGCTTCGTTGATGTTGTTGACGTACTCATCAAGCATGGAGTGGATGTGAATGCAATTGATAGGACATTGCTGCAATCTTCGAAGCCATTTCTCCACGCCAATGTTGATTGCAATGCTTTGTTCGCTGCTGTTGTTAGCAGGCAGATTGATGTTGTCAGATTATTGTTGCAGGTTGGTGTAAAGCTTGATATGAAGGTGAAACTAGGGGCATGGTCATGGGAAACAGAAACAGGGGAAGAATTTCGAGTTGGTGTTGGTCTAGCCGAAGCATACCCTATAACATGGTGTGCTGTGGAATATTTTGAATCCACTGGTTCTATATTGCAGATGCTTCTTAGCCATATTTCCCCAAATACATTGCACATTGGAAGAACCCTCTTGCACCATGCCATTATCTGCAACAATGAGAAAGCTCTTAACATACTTCTAAAGAATGGCGCGAATGTTGAAGCGCCGGTGCAAACGGATGTGCACCCAATTCACATGGCTGCAAGGCTTGGATCATGCAGCATTCTTCAATGCTTGATTAAAGGTGGGTGTGACTTGGATTCAAGAACAAAATCTGGTGACACTGCAGTAATGATTTGTGTAAGGTATAAGCATGAGAAGTGCCTTAAAGTGTTAGCATCATCAGGTGCTGATTTGGGTTTGGTGAATTCATCTGGTCATTGTTTAGCTTCCATAGCGAATTCTGTTCAATGGAGTAATGTGTTCCAGAGAGTAATCCTTGATGTGATTAGATCAGGAAAGGTTGTTAAATCAAGCAATGCTTCGAGATTTTCTGCTTTGTTGTTTGCGACTCGCGCGAATGACATAGAGGGTGTTAAGAAACTTATTGAGAATGGCAACATTGATATGAATGAGCAAAATGAAAATGGTTTCTCGGCCGCGATGATCGCGGCTGCTATGGGTAATGTTGAGGCTTTTAGGCTTCTTCTTTTCGCCGGCGCCGACATACTTGAGCTTAAAAACAAGTATGGTTTGACAGCACTTAACCTCATAGATGTTAGCCAAAATGGTGAAGCATTTCAAAAGGTGATGCTTGAATTCGCGGTTAAAAGAGGGTGTGAAATTGAAGGTTCTAACGAAGTGAATCCTTTACACAGGGCAGCAAGATATGGAGCCATAGACATTGTTCAAAAGCTGTTAAAAGAAGGGAATTATGATGTGAATTCGTTTGATTCACAAGGATACACCCCATTGATGCTAGCGGCTAAAGCTTGCCGCGGCGACATGTGTAAGCTTTTGATCTCATTTGGAGCCAAATGTGAAGTTGAGAATGAGAGGCATGAGACAGCACTTTCACTAGCAAGAGAAAATGGAAATGGAAATGAAGCAGAGTTTTTGATATTAGATGAGGTAGCTAGAAGGTTAGTGTTGTGTGGTGGTAGAGTTAAGAAACACACAAAGTGTGGTAAAGGATCACCGCATAGCAAACAACTCAGGATGGTTAAGGTTGCTGGGATTTTAAGGTGGGGAAAAGCAAGTAAAAGGAATGTGGTTTGTGAAAATGCTAAGGTTGGAGCAAGTGAGAGATTTAGGTGGAATAGAAGGAAGAAGTTTGATGTTGATGAAGCAGGAATTTTTCATGTGGTTACTACAAAGAATAAGGAAGTGCATTTTGTATGTGAGGGTGGGGTGCAAATGGCTGAGTTGTGGGTTAGAGCCACATCCCCCAACCGCCCCCTTCCAGCGCCGTACAACCCATCTGCCGTGCAGTCTTCGATGGTTGCCACCGTCAACGGTAGTCAACGCCGCCGGAACGCCACACAACGACCCTCACGCATCCATCCGTCTGGCGTACCACCCGACGGCGCCTCCTATTGCTCTGCCTCAACACACGGCGCGGCTGAAGTCTTCCTGCGTCGTCGAGTAACAAGCAAGCGCCTCTACTATTTGACCTATGCATCCCCAGCCAGCGCCGCTTCCTGCCTTGTGTCTGAGCCCCCTCACACAACGTGTCTTTCTTTTAGCACCGGGCACCGGCGCTGCAATAAGAGAAATCAACTTCAAGACATGGAAAAGCCGAAGTTAtcgtatgctagcctcatcgttgtcctgaatcacatacttggcatgcatggtcagttttctatactcgtgTATGTGAGGGCTGTTCACCTTGCTCATATGGAGGTGGAAGGCTATGGCTCAATGGAAGTGGAACGCTATGGCTAA 2736 0.4488 MMMLVNSGSIRKQVFPIDYEREVSQRLVDAVHYGKNDTALELMADLYVDVNFVGTVSFKSKTTEIVLNDESAHRVKSVYEEFKTEVTALFLAAHSNNLTLLRKLLSVGGDINTRVFRGYATTATVREGHLKVLEVLINGGASQHACEEALMETSYMGRARFSELLMQKHMIRPHVAVHALVSASSRGFVDVVDVLIKHGVDVNAIDRTLLQSSKPFLHANVDCNALFAAVVSRQIDVVRLLLQVGVKLDMKVKLGAWSWETETGEEFRVGVGLAEAYPITWCAVEYFESTGSILQMLLSHISPNTLHIGRTLLHHAIICNNEKALNILLKNGANVEAPVQTDVHPIHMAARLGSCSILQCLIKGGCDLDSRTKSGDTAVMICVRYKHEKCLKVLASSGADLGLVNSSGHCLASIANSVQWSNVFQRVILDVIRSGKVVKSSNASRFSALLFATRANDIEGVKKLIENGNIDMNEQNENGFSAAMIAAAMGNVEAFRLLLFAGADILELKNKYGLTALNLIDVSQNGEAFQKVMLEFAVKRGCEIEGSNEVNPLHRAARYGAIDIVQKLLKEGNYDVNSFDSQGYTPLMLAAKACRGDMCKLLISFGAKCEVENERHETALSLARENGNGNEAEFLILDEVARRLVLCGGRVKKHTKCGKGSPHSKQLRMVKVAGILRWGKASKRNVVCENAKVGASERFRWNRRKKFDVDEAGIFHVVTTKNKEVHFVCEGGVQMAELWVRATSPNRPLPAPYNPSAVQSSMVATVNGSQRRRNATQRPSRIHPSGVPPDGASYCSASTHGAAEVFLRRRVTSKRLYYLTYASPASAASCLVSEPPHTTCLSFSTGHRRCNKRNQLQDMEKPKLSYASLIVVLNHILGMHGQFSILVYVRAVHLAHMEVEGYGSMEVERYG 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01026 911 ProSiteProfiles Ankyrin repeat profile. 84 116 IPR002110 GO:0005515
Aip10g01026 911 Gene3D - 16 170 IPR036770 -
Aip10g01026 911 PANTHER ANKYRIN REPEAT-CONTAINING 8 742 - -
Aip10g01026 911 ProSiteProfiles Ankyrin repeat region circular profile. 582 614 - -
Aip10g01026 911 Gene3D - 427 527 IPR036770 -
Aip10g01026 911 Gene3D - 528 644 IPR036770 -
Aip10g01026 911 ProSiteProfiles Ankyrin repeat profile. 478 510 IPR002110 GO:0005515
Aip10g01026 911 ProSiteProfiles Ankyrin repeat profile. 582 614 IPR002110 GO:0005515
Aip10g01026 911 ProSiteProfiles Ankyrin repeat profile. 548 572 IPR002110 GO:0005515
Aip10g01026 911 ProSiteProfiles Ankyrin repeat profile. 308 340 IPR002110 GO:0005515
Aip10g01026 911 ProSiteProfiles Ankyrin repeat region circular profile. 478 505 - -
Aip10g01026 911 Gene3D - 171 261 IPR036770 -
Aip10g01026 911 SMART ANK_2a 582 611 IPR002110 GO:0005515
Aip10g01026 911 SMART ANK_2a 84 113 IPR002110 GO:0005515
Aip10g01026 911 SMART ANK_2a 341 370 IPR002110 GO:0005515
Aip10g01026 911 SMART ANK_2a 478 507 IPR002110 GO:0005515
Aip10g01026 911 SMART ANK_2a 175 204 IPR002110 GO:0005515
Aip10g01026 911 SMART ANK_2a 374 403 IPR002110 GO:0005515
Aip10g01026 911 SMART ANK_2a 444 474 IPR002110 GO:0005515
Aip10g01026 911 SMART ANK_2a 221 250 IPR002110 GO:0005515
Aip10g01026 911 SMART ANK_2a 308 337 IPR002110 GO:0005515
Aip10g01026 911 SMART ANK_2a 548 578 IPR002110 GO:0005515
Aip10g01026 911 SMART ANK_2a 116 145 IPR002110 GO:0005515
Aip10g01026 911 SUPERFAMILY Ankyrin repeat 27 255 IPR036770 -
Aip10g01026 911 PANTHER ANKYRIN DOMAIN PROTEIN 8 742 - -
Aip10g01026 911 ProSiteProfiles Ankyrin repeat region circular profile. 548 572 - -
Aip10g01026 911 Pfam Ankyrin repeats (many copies) 451 499 IPR002110 GO:0005515
Aip10g01026 911 ProSiteProfiles Ankyrin repeat profile. 341 373 IPR002110 GO:0005515
Aip10g01026 911 SUPERFAMILY Ankyrin repeat 308 636 IPR036770 -
Aip10g01026 911 ProSiteProfiles Ankyrin repeat profile. 374 406 IPR002110 GO:0005515
Aip10g01026 911 ProSiteProfiles Ankyrin repeat profile. 179 207 IPR002110 GO:0005515
Aip10g01026 911 MobiDBLite consensus disorder prediction 768 790 - -
Aip10g01026 911 Gene3D - 275 426 IPR036770 -
Aip10g01026 911 Pfam Ankyrin repeats (3 copies) 345 403 IPR002110 GO:0005515
Aip10g01026 911 Pfam Ankyrin repeats (3 copies) 533 611 IPR002110 GO:0005515
Aip10g01026 911 ProSiteProfiles Ankyrin repeat region circular profile. 308 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01026 Aip-Chr10 13556515 13567083 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01026 348 603 Miscellaneous Gene Families AT3G09550 25.962 4.81e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01026 - - gmx:100795638 1165.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01026 10 13556515 13567083 Aip10g01026 10 13556515 13567083 ECH