Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01025 ATGCCGCAATCAGAAAAGTCATTCAGTAACAAACTTCCAATAATCTGGATTCCAGGGGATGGCAGATGTTTGTTTAGGTCTGTAGTGTATGGTGCATGCCTTAGAAGAAGGGAGCCATCTCCAAGTCTCAATAGGCAAAAAGAACTTGCAGATGACCTTAGAGCCAAAGTCGTAGATGAATTCATCAAGAGGAGGGCAGATACTGAATGGTTTCTTGAGGATGACTTTGACACCTACACAGGACAAATGCGAAAGCCTCACGTTTGGGGAGGAGAACCTGAACTTCTTATGTCCTCACATGTTTTACAGATGCCTATAACAGTGGTGATGGAGGATAAGAAATCCAAGAATCTTAAAGTAATAGCTGAATATGGTCAAGAGTATGGTGAGGATAACCCAATTTGTGTTATCTATCACGGTTATGGCCACTATGATGCCTTCAAGAATTCCAATAACACTACATATTCGCAGAAATGA 477 0.413 MPQSEKSFSNKLPIIWIPGDGRCLFRSVVYGACLRRREPSPSLNRQKELADDLRAKVVDEFIKRRADTEWFLEDDFDTYTGQMRKPHVWGGEPELLMSSHVLQMPITVVMEDKKSKNLKVIAEYGQEYGEDNPICVIYHGYGHYDAFKNSNNTTYSQK 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01025 158 SUPERFAMILY Cysteine proteinases 12 149 IPR038765 -
Aip10g01025 158 ProSiteProfiles OTU domain profile. 12 150 IPR003323 -
Aip10g01025 158 PANTHER OS01G0900900 PROTEIN 10 156 - -
Aip10g01025 158 Gene3D - 2 157 - -
Aip10g01025 158 Pfam OTU-like cysteine protease 18 144 IPR003323 -
Aip10g01025 158 PANTHER OTU DOMAIN CONTAINING PROTEIN 10 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01025 Aip-Chr10 13528924 13540403 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01025 K18342 - gmx:100792132 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01025 10 13528924 13540403 Aip10g01025 10 13528924 13540403 ECH