Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01002 ATGGGTTCAGTCCAGACACCAATAGGGATGAGAAATTCTGCAATATTAGAAACTTCATGTGGATTCTTGTTGCAGGAACTGCAGATAATATGGGACGAAGTCGGAGAAGACAAATTCGAAAGGGAGAAGGTTCTGCTGGATTTGGAGCAAGAGTGCCTCGAGGTCTATAGACGAAAAGTCGACAAAGCAAATATCTCCAGAGCACATCTGCACCAAGAATTGGCTGAGGCCGAGGCTGAATTTACACACCTTCTGTTGTCCCTTGGTGAAAGATCTCTACCTGGACGGCCAGAAAAAAGGGCGGGAACACTAAAAGAGCAGCTAGATTCGATCACTCCAGCACTCCGAGAGATGCGTCTGAGGAAGGAAGAGAGGCTAAACCAGTTCCGAGCGGTGCAGGGGCAAATTCAAAAGATTTCTGCAGAAATTGCAGGTAATTCAGATAACGCAACATCAATCATTGTAGTAAACGAGAATGATCTTTCACTAAAAAGACTTGAGGAGTATCAGAACGAGTTGCAAAGGCTCTACAATGAGAAGAATGAAAGACTCCAGCAAGTGGAGAAATACATAGACGTAATATACAGCCTGTCCACAATCTTGGGAAAAGATTCCTCAGCGATCATCATGGAAGTTCACCCAAGCTTGAATGATTTGTGTGGAATAACAAAGAACATAAGTGACAAAATCCTGGATAAACTTGACACCACAGTAGAGTCCCTTTATGAAGAAAAGAAAACCCGACTTGACAAGCTTCACCANNNNNNNNNNNNNNNNNNNNNNNNNATGGATGCACCTTACAATGACCGACAACCTTTTTCACACGTAATCAATTTGTTATCAGTCTCATCTTCAGAAGTATCTGATCCAGGAAGTCTTACTCTAGAAATAGTGCAGCAGACTGAAGCTGAAGTCAAGAGACTGGATCAACTAAAAGCAAGCAAGATGAAAGAGTTATTCCAGAAGAAACGGGAGGAACTGGAATTGATATGCAAGAAATCACATGTGGAGATACCTTCACAGACAGAGATGAAGAATATCATTAACCTTATAAACTCAGGGGAGATTGACCATTCCAATCTCCTCATGAGTATGGATGAACAGATATCAAGAGCAAAAGAAGAGGCTGCTAGCAGGAAGGCTATAATGGAGAAGGTGGAGAAGTGGATGTTAGCACGTGATGAAGAACGCTGGCTAGAAGAATATAGCACGGATGAGAATCGATACTCAGTCAGCAGAGGAGCTCACAAAAACTTGAGACGTGCTGAACGTGCCCGTATAATGGTCAGCAAAATGCCAGCTTTGGTAGATTTGATAATTAAAATGGCCAGATCTTGGGAAGAAGAACGAAATAAAGTTTTCTTGTATGATCAGGTACCTCTAATGGAAATGTTGGAAGAGTATAACATGCTAAGAAGAGAAAAAGAGGAGGAAAAGAAAAGACAGCAGCCATGGGAAAAGAAGAAGGTCCAGAGTCAAGTAGCAGTTGAGCGAGATAATATGTATGCATCAAGACCAAGCACCAGCAGTAGACGAATTCCAAATAAAAGCTGTAATGGAGGTCTAGACAGTCCGATGCCAGTGAACAGAAGGCTTCCCATCAGTATCCATCAATTCGGATCAAACAGCATAAATTCAGGAAATCAAGCTATATCCTTCATTAATGATGGAAGGAAGATGCAAAGAAGAAAGATGTTTGGTGAATCTGGCATTCCTCCTCATTCAAGAGACGAGGCATCTTCTGTGATATCAACACATTCTGGACCATTTTCTCCTTAA 1779 0.4143 MGSVQTPIGMRNSAILETSCGFLLQELQIIWDEVGEDKFEREKVLLDLEQECLEVYRRKVDKANISRAHLHQELAEAEAEFTHLLLSLGERSLPGRPEKRAGTLKEQLDSITPALREMRLRKEERLNQFRAVQGQIQKISAEIAGNSDNATSIIVVNENDLSLKRLEEYQNELQRLYNEKNERLQQVEKYIDVIYSLSTILGKDSSAIIMEVHPSLNDLCGITKNISDKILDKLDTTVESLYEEKKTRLDKLHXXXXXXXXXMDAPYNDRQPFSHVINLLSVSSSEVSDPGSLTLEIVQQTEAEVKRLDQLKASKMKELFQKKREELELICKKSHVEIPSQTEMKNIINLINSGEIDHSNLLMSMDEQISRAKEEAASRKAIMEKVEKWMLARDEERWLEEYSTDENRYSVSRGAHKNLRRAERARIMVSKMPALVDLIIKMARSWEEERNKVFLYDQVPLMEMLEEYNMLRREKEEEKKRQQPWEKKKVQSQVAVERDNMYASRPSTSSRRIPNKSCNGGLDSPMPVNRRLPISIHQFGSNSINSGNQAISFINDGRKMQRRKMFGESGIPPHSRDEASSVISTHSGPFSP 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01002 592 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 8 8 592 - -
Aip10g01002 592 Gene3D - 369 504 - -
Aip10g01002 592 MobiDBLite consensus disorder prediction 556 592 - -
Aip10g01002 592 Coils Coil 60 80 - -
Aip10g01002 592 MobiDBLite consensus disorder prediction 479 494 - -
Aip10g01002 592 MobiDBLite consensus disorder prediction 557 571 - -
Aip10g01002 592 MobiDBLite consensus disorder prediction 479 526 - -
Aip10g01002 592 Pfam Microtubule associated protein (MAP65/ASE1 family) 23 517 - -
Aip10g01002 592 Coils Coil 298 318 - -
Aip10g01002 592 Coils Coil 461 481 - -
Aip10g01002 592 MobiDBLite consensus disorder prediction 578 592 - -
Aip10g01002 592 MobiDBLite consensus disorder prediction 502 517 - -
Aip10g01002 592 Coils Coil 159 190 - -
Aip10g01002 592 Coils Coil 242 253 - -
Aip10g01002 592 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 8 592 IPR007145 GO:0000226|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01002 Aip-Chr10 13192822 13197224 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01002 16 553 EF-hand Containing Proteins AT5G62250 37.818 5.25e-93 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01002 K16732 - gmx:100791080 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01002 10 13192822 13197224 Aip10g01002 10 13192822 13197224 ECH