Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00675 ATGGCTACCACAGACCCGGCAGAGAAGCTGAAATTAGAAACAAGCTTCGACTATGAGAAGAACGAAGAGAAAAAAGAAGAAGAAGAAGAAGTGTCGCCGGTTGAAGAAGTGCGACTAACGGTTTCGAACAGTGACGATCCAAGCCAACCAGTGTGGACCTTCAGAATGTGGTTCTTAGGTCTAATCTCATGCGCGCTATTATCTTTCCTCAACCAGTTCTTCGCTTACCGTACGGAGCCACTCATCATAACTCAGATCACCGTTCAGGTCGCCACACTTCCCATCGGTCACTTCATGGCGGCGGTGCTGCCAACTACAAAGTTTCGCCTCGGATCCAAAACGATGTCGTTTAATCCGGGCCCCTTTAACATGAAGGAGCACGTGCTTATAACCATATTCGCGAATGCGGCATCTCTTTCTTTGCTTCCTGGCTTCTCATCATTACTACTCAGAGCTTTGCATGAGAAAGACAACAGCCATGGAATTTCACGGGCAAAGTTCTTCTTCATTGCACTAGTGTGCAGTTTTTCATGGTACGTGGTACCTGGATTCTTCTTCACAACGCTAACAAACATCTCATGGGTCTGTTGGGTGTTCTCCAAATCAGTAACAGCTCAACAACTAGGCTCAGGCATGAGAGGCTTAGGCCTTGGAGCCATCACACTTGATTGGAGCGCCGTGGCATCGTTCTTGTTCAGCCCTCTCATCTCGCCCTTTTTCGCCATTGTCAATGTCTTTGTTGGCTATGCAATGATAGTATATGTGGTTATTCCTATTGCATATTGGGGTTTGAATGTGTATAATGCAAATAGATTCCCTATTTTTTCATCACATTTGTTCACATCTCAAGGTCAACCTTATAACATATCTGCTATTGTTAATGACAAGTTTGAGTTGGATATTGCCAAGTATCAAGAGCAAGGAAGAATCAATCTTAGTGTCTTTTTTGCTCTCACTTATGGTTTTGGATTTGCTACCATTGCATCTACCATCACACACGTTGCTTGCTTCTATGGAAGGGAGATTATGGAACGTTATCGTGCTTCATTCAAAGGCAAAGAAGATATCCACACAAAACTGATGAAGACATACAAAGACATACCATCTTGGTGGTTTCATTTGTTACTAGGTGTTGCTTTAATGGTTTCTCTAGCACTATGCATCTTTTTAAAAAACCAAGTTCAAATGCCATGGTGGGGACTTCTCTTTGCCGCGGTCTTAGCCTTTGGATTTACCCTTCCAATTAGCATCATTACTGCCACCACAAACCAGACACCAGGGTTGAATATCATCACCGAGTATGTCTTTGGTCTCATATACCCTGGAAGACCAATTGCAAATGTTTGCTTCAAAACTTATGGCTACATCAGCATGTCTCAAGCCGTCTCGTTTCTCAGTGATTTCAAGCTTGGACACTACATGAAAATCCCCCCAAGATCAATGTTCTTGGTGCAGTTCATAGGTACAATGCTTGCTGGAACTATCAACATAGGGGTAGCATGGTGGTTGCTAAACTCTATAAAAAACATATGCCATGATGATCTCCTTCCAGAAGGGAGTCCCTGGACATGCCCCGGTGACCGTGTATTCTTTGATGCATCAGTAATCTGGGGATTGGTAGGACCAAAGAGAATCTTTGGCTCCAAAGGAAACTACAGTGCAATGAATTGGTTCTTCCTTGGTGGTGCAATAGGGCCAGTTATTGTTTGGCTATTGCACAAGGCATTCCCTAAACAATCATGGATACCCTTCATCAACCTCCCAGTTCTCCTTGGAGCAACCGGGATGATGCCACCCGCGACACCATTGAACTACAATGCCTGGATTTTCTTTGGAACCATTTTCAACTTCTTTGTGTTCCGATACAGGAAGGGTTGGTGGCAGAGATATAACTACGTCCTATCGGCCGCCCTTGATGCCGGGGTGGCGTTTATGACTGTGCTGCTGTTCTTTTCTCTGGGATTGGAGAACAAGAGTATTAGTTGGTGGGGAAATGATGGTGAACATTGTCCATTAGCATCTTGTCCAACAGCCAAAGGCATTGTGGTTGATGGTTGCCCAACACACTAA 2070 0.4435 MATTDPAEKLKLETSFDYEKNEEKKEEEEEVSPVEEVRLTVSNSDDPSQPVWTFRMWFLGLISCALLSFLNQFFAYRTEPLIITQITVQVATLPIGHFMAAVLPTTKFRLGSKTMSFNPGPFNMKEHVLITIFANAASLSLLPGFSSLLLRALHEKDNSHGISRAKFFFIALVCSFSWYVVPGFFFTTLTNISWVCWVFSKSVTAQQLGSGMRGLGLGAITLDWSAVASFLFSPLISPFFAIVNVFVGYAMIVYVVIPIAYWGLNVYNANRFPIFSSHLFTSQGQPYNISAIVNDKFELDIAKYQEQGRINLSVFFALTYGFGFATIASTITHVACFYGREIMERYRASFKGKEDIHTKLMKTYKDIPSWWFHLLLGVALMVSLALCIFLKNQVQMPWWGLLFAAVLAFGFTLPISIITATTNQTPGLNIITEYVFGLIYPGRPIANVCFKTYGYISMSQAVSFLSDFKLGHYMKIPPRSMFLVQFIGTMLAGTINIGVAWWLLNSIKNICHDDLLPEGSPWTCPGDRVFFDASVIWGLVGPKRIFGSKGNYSAMNWFFLGGAIGPVIVWLLHKAFPKQSWIPFINLPVLLGATGMMPPATPLNYNAWIFFGTIFNFFVFRYRKGWWQRYNYVLSAALDAGVAFMTVLLFFSLGLENKSISWWGNDGEHCPLASCPTAKGIVVDGCPTH 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00675 689 PANTHER OLIGOPEPTIDE TRANSPORTER 4 149 688 - -
Aip10g00675 689 MobiDBLite consensus disorder prediction 10 31 - -
Aip10g00675 689 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 149 655 IPR004813 GO:0035673
Aip10g00675 689 MobiDBLite consensus disorder prediction 1 31 - -
Aip10g00675 689 PANTHER ISP4 LIKE PROTEIN 24 138 IPR004648 GO:0055085
Aip10g00675 689 PANTHER OLIGOPEPTIDE TRANSPORTER 4 24 138 - -
Aip10g00675 689 Pfam OPT oligopeptide transporter protein 148 652 IPR004813 GO:0035673
Aip10g00675 689 Pfam OPT oligopeptide transporter protein 52 138 IPR004813 GO:0035673
Aip10g00675 689 PANTHER ISP4 LIKE PROTEIN 149 688 IPR004648 GO:0055085
Aip10g00675 689 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 150 657 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00675 Aip-Chr10 7084578 7090417 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00675 149 689 Organic Solute Cotransporters AT5G64410 78.743 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00675 - - ahf:112714781 1105.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00675 10 7084578 7090417 Aip10g00675 10 7084578 7090417 ECH