Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00673 ATGGCAGCAGCCGCGGTGCTTCGCTCTCTTCGCCGCCGTGATGTCGCCTCTGCTTCCGTCTCAGCCTTTCGTTCGTTGTCGGGTAGCACTAAACCAGCTTATGTAGCTCACAAGTGGTCAAGTTTGTGTCGACCATTCAGTTCTCGGCCTGCTGGAAATGATGTCATCGGTATTGATTTGGGTACTACAAATTCCTGTGTTGCTGTTATGGAAGGAAAGAATCCTAAAGTTATTGAAAACTCTGAAGGTTCTCGAACAACACCATCTGTGGTTGCTTTCAACCAGAAAGGGGAGCTGCTTGTTGGTACACCGGCAAAACGTCAGGCAGTAACAAACCCAACAAACACCGTTTTTGGTACCAAGCGGTTGATTGGTCGGCGCTTTGACGATCCCCAAACACAGAAGGAGATGAAAATGGTTCCTTACAAGATTGTTAAGGCTCCAAATGGAGATGCGTGGGTTGAAGCTAATGGCCAGCAATATTCTCCTAGCCAAATTGGTGCCTTTGTTCTCACCAAGATGAAGGAGACAGCAGAAGCTTATCTAGGGAAGTCAATTTCCAAGGCTGTAATTACTGTCCCAGCTTACTTCAATGATGCTCAGAGGCAGGCAACAAAAGATGCTGGTAGAATTGCAGGTCTTGATGTGCAGAGAATTATCAATGAGCCAACAGCTGCAGCACTTTCATATGGGATGAACAACAAAGAGGGCCTTATTGCGGTTTTTGATCTTGGAGGTGGAACATTTGATGTCTCTATCTTGGAAATCTCTAATGGTGTCTTTGAGGTGAAAGCAACAAATGGTGACACATTCTTGGGAGGAGAGGACTTTGACAATGCCTTACTGGACTTCCTTGTAAGCGAATTCAAGAGGACCGACAGTATTGACCTTTCAAAAGACAGGCTTGCTTTGCAGAGACTTCGTGAAGCAGCAGAGAAGGCTAAGATAGAACTGTCTTCAACATCTCAAACGGAAATAAACCTTCCTTTCATCACTGCTGATGCATCTGGTGCTAAGCATCTGAACATCACATTGACCAGATCCAAGTTTGAGGCTTTGGTGAATCACTTGATTGAAAGGACCAAGGCACCATGTAAGAGCTGCTTGAAGGATGCTAATATATCTATCAAGGATGTTGATGAGGTCCTTCTTGTGGGAGGGATGACCCGTGTGCCTAAAGTCCAGGAAGTGGTTTCAGCTATCTTTGGAAAGTCTCCTAGCAAAGGAGTAAATCCTGATGAGGCAGTTGCCATGGGAGCAGCAATCCAGGGTGGTATCCTACGTGGAGATGTTAAAGAGCTATTGCTACTTGATGTTACCCCACTTTCTCTTGGTATTGAGACTTTGGGTGGTATTTTTACTAGGTTGATCAACCGCAACACTACTATTCCTACCAAAAAGAGTCAGGTGTTTTCAACAGCAGCTGACAACCAAACACAGGTGGGTATCAAGGTGCTGCAAGGTGAGAGGGAAATGGCTGCAGACAACAAAATGCTTGGAGAATTTGAGctcttaactctaactctacccgcattctaa 1539 0.4457 MAAAAVLRSLRRRDVASASVSAFRSLSGSTKPAYVAHKWSSLCRPFSSRPAGNDVIGIDLGTTNSCVAVMEGKNPKVIENSEGSRTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTVFGTKRLIGRRFDDPQTQKEMKMVPYKIVKAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSISKAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVSEFKRTDSIDLSKDRLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVNHLIERTKAPCKSCLKDANISIKDVDEVLLVGGMTRVPKVQEVVSAIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKMLGEFELLTLTLPAF 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00673 512 Gene3D Actin; Chain A, domain 4 274 361 - -
Aip10g00673 512 Gene3D - 56 422 - -
Aip10g00673 512 PRINTS 70kDa heat shock protein signature 247 257 - -
Aip10g00673 512 PRINTS 70kDa heat shock protein signature 82 94 - -
Aip10g00673 512 PRINTS 70kDa heat shock protein signature 379 395 - -
Aip10g00673 512 PRINTS 70kDa heat shock protein signature 433 452 - -
Aip10g00673 512 PRINTS 70kDa heat shock protein signature 189 209 - -
Aip10g00673 512 PRINTS 70kDa heat shock protein signature 54 67 - -
Aip10g00673 512 PRINTS 70kDa heat shock protein signature 410 430 - -
Aip10g00673 512 PRINTS 70kDa heat shock protein signature 105 113 - -
Aip10g00673 512 CDD HSPA9-like_NBD 52 427 - -
Aip10g00673 512 Gene3D - 231 411 - -
Aip10g00673 512 Coils Coil 297 324 - -
Aip10g00673 512 ProSitePatterns Heat shock hsp70 proteins family signature 3. 382 396 IPR018181 -
Aip10g00673 512 SUPERFAMILY Actin-like ATPase domain 55 235 IPR043129 -
Aip10g00673 512 Pfam Hsp70 protein 55 505 IPR013126 GO:0005524|GO:0140662
Aip10g00673 512 ProSitePatterns Heat shock hsp70 proteins family signature 1. 58 65 IPR018181 -
Aip10g00673 512 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 423 511 IPR029047 -
Aip10g00673 512 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 429 504 IPR029047 -
Aip10g00673 512 ProSitePatterns Heat shock hsp70 proteins family signature 2. 241 254 IPR018181 -
Aip10g00673 512 PANTHER HEAT SHOCK PROTEIN 70KDA 34 507 IPR013126 GO:0005524|GO:0140662
Aip10g00673 512 PANTHER HEAT SHOCK 70 KDA PROTEIN, MITOCHONDRIAL 34 507 - -
Aip10g00673 512 SUPERFAMILY Actin-like ATPase domain 236 427 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00673 Aip-Chr10 7032049 7034370 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00673 55 504 Miscellaneous Gene Families AT5G42020 55.388 8.77e-167 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00673 K04043 - gmx:100804559 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00673 10 7032049 7034370 Aip10g00673 10 7032049 7034370 ECH