Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00671 ATGGCTTCCGCCGTCCTAGCCAACCGAAACGAACCTAATTGGCCGCAGCATAGAGGCGGTGTAGCTAGATTCATGGGGAAAGTACCATTTTCTAACCCTAACCCTAATTCAAAATTTGGCAATAAAAAGAATCAATCGTCGTTAGATGATGCTTCCTCCATAAACCGGAGGTCCAACGACGGCAACCATTACCAATATGTCACGTTCAACGTGGCGTCGTACTCAAAGAAGGAACTGAACGAGCTCAAGAATCGCTTGATCTTGGAGCTCGAGCAGATTCGAAAGCTCAAGAGTCGAATCGAGAATGGAGAATTTCAACCCAAGCAGAGCTTCAATGGCCCTCCCAAAAAATCGTCGACCAAGAAGATCTCTGGCAACAAACGGCCATTTCCGGTGAATTCCATCACCAAAGATTTGAAACGATCGAATTCAGAGATTGGAAACTTGATGAAGTCCTGCTCGCAGGTTCTACAGAAGATCATGAAGCACAAGGTTGGGTGGATCTTCAACGCCCCCGTTGATGTCGTTGGAATGGGTCTTCACGATTATTATGATATAGTGAAGAAACCCATGGATCTGGGCACCGTGAAGTCCAATCTCGCGAAGAATGTGTACTCTACGCCGTCGGATTTTGCCGCCGATGTGCGATTGACGTTTAAAAATGCGCTGACGTATAATCCCCCTGGTCACGATGTGCACAGCATGGCTGACCTGCTTTTATCCAAGTTTGAAGAGCTGTATCGTCCTGTGCATGAGAAATTCGAGGACTCGATAAGGCAGCAGGATCAGGATGTTGATGAGGAATTGCAGGCCAGTTCATGGAATCATGTGGAACCGGAGAGGGTTGAGAGGGTTAAGAACAAGAAGGAGAATGTGATCCCTCCGGCAAGGTTTCAACCCGAGCCAGTGCAGGTCCCTGCGAGCTCTTCGAACCCTCCAATGGTGCAGTCACCTGTGCGCACCCCTTCCCCTATGAGAGCCCAGCCGGTGAAGCCTTTGAAGCAGCCAAAGCCTAAGGCGAAGGACCCCAATAAGAGGGAGATGAGCCTTGAGGAGAAACACAAGTTGGGTATTGGGCTGCAGAGTTTGCCTCCTGAGAAAATGGAGCAGGTGGTACAGATCATAAGGAAGAGGAACGGGAATCTGAAGCAGGACGGGGATGAGATTGAGCTTGATATTGAGGCTGTTGACACTGAGACCCTTTGGGAACTTGATCGTTTGGTGACAAATTGGAAGAAGATGATGAGCAAAATTAAGCGGCAGGCACTACTTGGCAACTTGAACAACAACAATGCTGCATCCAATAAATCCAATGGGGAATTGGCTATTAGTGAGAAGGTTGATGTGGCTCCGGCTGAGGTGAAGAAACCAAAGAAAATGGATGCTGGGGATGAGGATATTGACATTGGGGATGAGATGCCGATGAGTACCTTCCCCCCTGTGGAGATTGAGAAAGATAAAGAAGTCGCCGGCGGCCATGCTAGTAGTAGTTCTAGTAGCTCCAGCAGTTCAAGTAGTGATTCATCGTCGTCTAGTGATTCAGATTCAGCGAGTTCCTCAAGGAGTGATTCTGAAGCAGACAACGGTCACTTATAG 1596 0.4831 MASAVLANRNEPNWPQHRGGVARFMGKVPFSNPNPNSKFGNKKNQSSLDDASSINRRSNDGNHYQYVTFNVASYSKKELNELKNRLILELEQIRKLKSRIENGEFQPKQSFNGPPKKSSTKKISGNKRPFPVNSITKDLKRSNSEIGNLMKSCSQVLQKIMKHKVGWIFNAPVDVVGMGLHDYYDIVKKPMDLGTVKSNLAKNVYSTPSDFAADVRLTFKNALTYNPPGHDVHSMADLLLSKFEELYRPVHEKFEDSIRQQDQDVDEELQASSWNHVEPERVERVKNKKENVIPPARFQPEPVQVPASSSNPPMVQSPVRTPSPMRAQPVKPLKQPKPKAKDPNKREMSLEEKHKLGIGLQSLPPEKMEQVVQIIRKRNGNLKQDGDEIELDIEAVDTETLWELDRLVTNWKKMMSKIKRQALLGNLNNNNAASNKSNGELAISEKVDVAPAEVKKPKKMDAGDEDIDIGDEMPMSTFPPVEIEKDKEVAGGHASSSSSSSSSSSSDSSSSSDSDSASSSRSDSEADNGHL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00671 531 MobiDBLite consensus disorder prediction 1 20 - -
Aip10g00671 531 ProSiteProfiles NET domain profile. 338 419 IPR027353 -
Aip10g00671 531 Gene3D - 112 269 IPR036427 GO:0005515
Aip10g00671 531 MobiDBLite consensus disorder prediction 492 524 - -
Aip10g00671 531 PANTHER OSJNBA0053K19.4 PROTEIN 38 527 - -
Aip10g00671 531 MobiDBLite consensus disorder prediction 335 349 - -
Aip10g00671 531 MobiDBLite consensus disorder prediction 30 60 - -
Aip10g00671 531 MobiDBLite consensus disorder prediction 258 291 - -
Aip10g00671 531 Coils Coil 76 99 - -
Aip10g00671 531 Pfam Bromodomain extra-terminal - transcription regulation 347 409 IPR027353 -
Aip10g00671 531 PANTHER TRANSCRIPTION FACTOR GTE2 38 527 - -
Aip10g00671 531 SUPERFAMILY Bromodomain 143 254 IPR036427 GO:0005515
Aip10g00671 531 PRINTS Bromodomain signature 164 177 IPR001487 GO:0005515
Aip10g00671 531 PRINTS Bromodomain signature 180 196 IPR001487 GO:0005515
Aip10g00671 531 PRINTS Bromodomain signature 196 214 IPR001487 GO:0005515
Aip10g00671 531 PRINTS Bromodomain signature 214 233 IPR001487 GO:0005515
Aip10g00671 531 ProSiteProfiles Bromodomain profile. 161 233 IPR001487 GO:0005515
Aip10g00671 531 SMART bromo_6 142 252 IPR001487 GO:0005515
Aip10g00671 531 Gene3D - 341 418 IPR038336 -
Aip10g00671 531 MobiDBLite consensus disorder prediction 26 60 - -
Aip10g00671 531 MobiDBLite consensus disorder prediction 104 134 - -
Aip10g00671 531 MobiDBLite consensus disorder prediction 454 531 - -
Aip10g00671 531 Pfam Bromodomain 153 237 IPR001487 GO:0005515
Aip10g00671 531 CDD Bromo_plant1 149 247 IPR037377 -
Aip10g00671 531 MobiDBLite consensus disorder prediction 258 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00671 Aip-Chr10 6961192 6964043 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00671 - - adu:107468545 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00671 10 6961192 6964043 Aip10g00671 10 6961192 6964043 ECH