Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00660 ATGGAACTGAGTAGCATCAAAGATGCATTTGACCGTGTAGCTAAGAAGCAAAAGTTATCCTCTTCCAAGTCTCAAGAAGTTGTTGACCAGGTGGGGCGTGAAATTGAGCAGGCATTGGCAACAATCCAGGCACCAAATGGCCCCTCAACCCCTGTTGATCAAAAGTCCGTTCTTACAGATCTGAAGTCAAAGCTTAATGCTATTGTGGCACTTAAACAGTTAGAAGGACCACAGAAGGAACTGAATCTAAGTCTTTCCAAGTACCAAAAACTCCTTGAAAAATATTTAAACCCCGACATATCAAAGGCTTACAGAAACGTTGACTTTGATAATCATATTGTAAATCAGATCATTGCAAGTCACTTTTACCATCAAGGTTTATTTGATCTTGGAGATAGCATTATAAATGAGGCTGGAGAGCTGGATTTAACTGCTCTAAGGTTGAAGTTCATCGAAATGCATCAGATTCTTGAAGCTATGAGGGTTAGAAATCTTCAGCCTGCTCTAACATGGGGCTCTGCCAACCGGGATGAACTTGTCAAGATTGGTTCCAATCTTGAGTTCAAGATTCACACATTGCAGTTTGTAGAGGAAGGCTTGAGAGCTCCCCTTATTCTGATTTGA 624 0.4103 MELSSIKDAFDRVAKKQKLSSSKSQEVVDQVGREIEQALATIQAPNGPSTPVDQKSVLTDLKSKLNAIVALKQLEGPQKELNLSLSKYQKLLEKYLNPDISKAYRNVDFDNHIVNQIIASHFYHQGLFDLGDSIINEAGELDLTALRLKFIEMHQILEAMRVRNLQPALTWGSANRDELVKIGSNLEFKIHTLQFVEEGLRAPLILI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00660 207 Pfam CTLH/CRA C-terminal to LisH motif domain 149 197 IPR024964 -
Aip10g00660 207 ProSiteProfiles LIS1 homology (LisH) motif profile. 110 142 IPR006594 GO:0005515
Aip10g00660 207 PANTHER PROTEIN RMD5 HOMOLOG 1 197 - -
Aip10g00660 207 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 149 197 IPR006595 -
Aip10g00660 207 PANTHER MACROPHAGE ERYTHROBLAST ATTACHER-RELATED 1 197 IPR045098 GO:0004842|GO:0043161
Aip10g00660 207 SMART ctlh 149 203 IPR006595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00660 Aip-Chr10 6887999 6888740 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00660 K23333 - gmx:100799584 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00660 10 6887999 6888740 Aip10g00660 10 6887999 6888740 ECH