Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00642 ATGGATTCATTCTCTGTTGTGTTGTGTGTGTTAGGGTTAGTGATTGTGGGTCATGTGGCTTATGCCCAAGACTCACAAGATTACCTTGATGCTCACAACGCAGCAAGATCCGAGGTTGGTGTTCCAAATTTGTCTTGGGATGACAAAGTTGCAGCCTATGCACAAAACTACGCCAATCAGCGAAAAAGTGATTGCCAATTGGTCCATTCCAATGGCCAATATGGGGAGAACATTGCAGTGGGCAGCGCTGACTTTTCCGGCACGGATGCCGTGAAATTGTGGGTGGACGAAAAGGAATACTATGACTATGGTCCTAATAGTTGTGTGAGTGCCCAAGTCTGTGTCCACTACATACAAGTAATTTGGCGTGACTCGGTAAGACTTGGGTGCGCCAAAGTAACTTGCGATAATAATGCGGGCACTTTTGTTCTTTGCAGCTATGATCCAGGTGCTAATATCACCGATCAAAAGCCTTACTAA 480 0.4562 MDSFSVVLCVLGLVIVGHVAYAQDSQDYLDAHNAARSEVGVPNLSWDDKVAAYAQNYANQRKSDCQLVHSNGQYGENIAVGSADFSGTDAVKLWVDEKEYYDYGPNSCVSAQVCVHYIQVIWRDSVRLGCAKVTCDNNAGTFVLCSYDPGANITDQKPY 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00642 159 Pfam Cysteine-rich secretory protein family 29 147 IPR014044 -
Aip10g00642 159 Gene3D CAP 23 159 IPR035940 -
Aip10g00642 159 CDD CAP_PR-1 25 159 - -
Aip10g00642 159 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 3 159 IPR001283 -
Aip10g00642 159 SMART SCP_3 23 155 IPR014044 -
Aip10g00642 159 SUPERFAMILY PR-1-like 3 159 IPR035940 -
Aip10g00642 159 PRINTS Allergen V5/Tpx-1 family signature 44 62 IPR001283 -
Aip10g00642 159 PRINTS Allergen V5/Tpx-1 family signature 90 103 IPR001283 -
Aip10g00642 159 PRINTS Allergen V5/Tpx-1 family signature 114 130 IPR001283 -
Aip10g00642 159 PRINTS Allergen V5/Tpx-1 family signature 142 155 IPR001283 -
Aip10g00642 159 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 3 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00642 Aip-Chr10 6676810 6677289 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00642 K13449 - gmx:547547 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00642 10 6676810 6677289 Aip10g00642 10 6676810 6677289 ECH