Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00634 ATGGGTGTGACTAAGATCTCAACAATGCTTCCTCTCATGGCTGCCATAACCCTAACCATATTATTATTATCACAAGTTTGTTATGCACAAGACGCACCCCAAGACTACATCAACGCTCACAACAATGCCCGTTCCCAAGTTGGGGTTGGTCCAATGACATGGAATGCAACCCTTGCTTCTTTTGCACAAAACTATATTAACACACTCAAAGGAAGTTGTAGCTTGGTGCACTCTGGGGGTCCTTATGGAGAGAACCTTGCAGGGAGTACCGGCGATCTTACGGGCACGGCCGCGGTGAACTTGTGGGTGGCGGAGAAGCAATACTATCACTACAACTCTAATTCTTGTGACTCCGGCAAGGTTTGCGGCCACTATACTCAGGTGGTTTGGCGCAACTCGATTCATCTTGGGTGTGCCAAAGTGAGGTGTGATAATGGAGGAACAGTTATAAGTTGTAACTATGCTCCCCGTGGCAATATTGTTGGCCGAAAACCTTACTAG 501 0.4731 MGVTKISTMLPLMAAITLTILLLSQVCYAQDAPQDYINAHNNARSQVGVGPMTWNATLASFAQNYINTLKGSCSLVHSGGPYGENLAGSTGDLTGTAAVNLWVAEKQYYHYNSNSCDSGKVCGHYTQVVWRNSIHLGCAKVRCDNGGTVISCNYAPRGNIVGRKPY 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00634 166 SUPERFAMILY PR-1-like 18 166 IPR035940 -
Aip10g00634 166 Gene3D CAP 31 166 IPR035940 -
Aip10g00634 166 ProSitePatterns CRISP family signature 2. 149 160 IPR018244 GO:0005576
Aip10g00634 166 PANTHER PATHOGENESIS-RELATED PROTEIN 1 22 166 - -
Aip10g00634 166 Pfam Cysteine-rich secretory protein family 38 154 IPR014044 -
Aip10g00634 166 PRINTS Allergen V5/Tpx-1 family signature 52 70 IPR001283 -
Aip10g00634 166 PRINTS Allergen V5/Tpx-1 family signature 98 111 IPR001283 -
Aip10g00634 166 PRINTS Allergen V5/Tpx-1 family signature 122 138 IPR001283 -
Aip10g00634 166 PRINTS Allergen V5/Tpx-1 family signature 149 162 IPR001283 -
Aip10g00634 166 ProSitePatterns CRISP family signature 1. 123 133 IPR018244 GO:0005576
Aip10g00634 166 SMART SCP_3 31 162 IPR014044 -
Aip10g00634 166 CDD CAP_PR-1 33 166 - -
Aip10g00634 166 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 22 166 IPR001283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00634 Aip-Chr10 6611418 6612016 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00634 K13449 - qsu:112016185 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00634 10 6611418 6612016 Aip10g00634 10 6611418 6612016 ECH