Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00633 ATGGCACCCATTGTACAAGTGAAGCTCAACTTTATGAGCACAAGAAGAATTCGCAACATAATCAACAAGGAGTGCAGCCATGCTTGTAAGCCAAGTGTGCCACCCCACTTTCAACTTGCAAGGTTAGGCATTGTGGCTGATATAACCGCCTATGCTCAAGATTCACCGCAAGACTATCTTGATGCTCACAACGCAGCAAGATCAGAGGCAGGTGTTGCCGATTTGGTTTGGGACGACGACGTTGCGGCGTTCGCCGAGAACTACGCAACGGAACGGCAAGGGGACTGCGAAATGATCCACTCCGGTGGCGGCGACGAGGGTTACGGCGAGAACATTGCATGGAGCAGTGGTGATCTTGCAGGCAGCGAAGCAGTGGGAATGTGGGTGGATGAGAAAGACAAGTATGAGTACGATTCAAACTCATGTGTTGGCGGAGAGTGCCGTCACTACACTCAAGTTGTTTGGAGTAACACTATTCGGCTTGGATGTGCCAAAGTGAATTGCGATAATGGAGGCACTTTCATTACTTGTAACTACCATCCTCCTGGAAATTATGTTCACCAAAGGCCTTACTAG 576 0.4931 MAPIVQVKLNFMSTRRIRNIINKECSHACKPSVPPHFQLARLGIVADITAYAQDSPQDYLDAHNAARSEAGVADLVWDDDVAAFAENYATERQGDCEMIHSGGGDEGYGENIAWSSGDLAGSEAVGMWVDEKDKYEYDSNSCVGGECRHYTQVVWSNTIRLGCAKVNCDNGGTFITCNYHPPGNYVHQRPY 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00633 191 Pfam Cysteine-rich secretory protein family 60 179 IPR014044 -
Aip10g00633 191 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 47 191 IPR001283 -
Aip10g00633 191 SMART SCP_3 54 187 IPR014044 -
Aip10g00633 191 PRINTS Allergen V5/Tpx-1 family signature 174 187 IPR001283 -
Aip10g00633 191 PRINTS Allergen V5/Tpx-1 family signature 75 93 IPR001283 -
Aip10g00633 191 PRINTS Allergen V5/Tpx-1 family signature 147 163 IPR001283 -
Aip10g00633 191 PRINTS Allergen V5/Tpx-1 family signature 124 137 IPR001283 -
Aip10g00633 191 ProSitePatterns CRISP family signature 1. 148 158 IPR018244 GO:0005576
Aip10g00633 191 CDD CAP_PR-1 56 191 - -
Aip10g00633 191 Gene3D CAP 54 191 IPR035940 -
Aip10g00633 191 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 47 191 - -
Aip10g00633 191 ProSitePatterns CRISP family signature 2. 174 185 IPR018244 GO:0005576
Aip10g00633 191 SUPERFAMILY PR-1-like 53 191 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00633 Aip-Chr10 6607230 6608107 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00633 K13449 - gmx:100807250 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00633 10 6607230 6608107 Aip10g00633 10 6607230 6608107 ECH