Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g04053 ATGGTGTCTTCTTTGAGCTCAGCTAGCTCTACTTATTTTAATTGGAGTTATGCCCTCCGCCTCCGCCTTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTCAATTTATCCCCCCCTCCTAAAAAGAAGTGGAGACTGCTGTGTCTTAGGCATGAAAACGCTCCATTGGAAAATAATGGCTCCGAGTTCACAGATAAATTGGCAGGAGATTTGGTGAAGCCTAAAGGTGACAAGTCCAAGGAGTTAAATAAAGATTGGATTGCAACTCTCCATAAGATCATTAGTTCCATCGTTGATGGGGAACCTTGGGCAGTTCCTTGGACGGCAAAGACCATTGTTCAGGTTATGCTTCTTTGGATCGCTTCATTTTGGTTTGTAGGATCTTGGATAGTTCCATTTTTGGCTTCCATGGCGGGGTTTAGAAAGGAGTCTCTCACATACAGGGGACAAGCATTGTACAGCCTATTAACTGATATTGCTGAAGGTGTGGTTGGCATAGTGATACTTCATCGTTGCCTTGCAAAGTTTAAACCACTCACATCCGACTGGTTTAAATTTGAATTCAAAGGCAATTGGCTTTTTGATGTCAGTTTAGGCTGCCTCATGTTCCCTGTTATCAATCACCTGTCACAGGTGAACCTAAATTTGTTACCTGTGCTTCAATCTAGTCCTGTGACTGTCTCAAGCGTAGAGCAATCAATTGTGGCACGAGACCCAGTGGCAATGGCCCTCTATGCAATGGTTGTCTCAGTTTGCGCCCCAATATGGGAGGAGATCGTCTTCCGAGGTTTCCTTCTCCCGTCTTTAACCAAGTACATGCCACTATGGTCTGCCATATTAGTTAGCTCAGTAGCATTTGCCTTGGCACATTTTAACATTCAGAGGATGCTGCCACTTGTATTTCTAGGCATAGTGATGGGTGCTGTCTTTGTAAGATCTAAGAACCTCTTTCCATCAATGTTGTTGCATAGTTTGTGGAATGCTTTTGTATTTCTGGATCTAATGAAGTAA 1215 0.3506 MVSSLSSASSTYFNWSYALRLRLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNLSPPPKKKWRLLCLRHENAPLENNGSEFTDKLAGDLVKPKGDKSKELNKDWIATLHKIISSIVDGEPWAVPWTAKTIVQVMLLWIASFWFVGSWIVPFLASMAGFRKESLTYRGQALYSLLTDIAEGVVGIVILHRCLAKFKPLTSDWFKFEFKGNWLFDVSLGCLMFPVINHLSQVNLNLLPVLQSSPVTVSSVEQSIVARDPVAMALYAMVVSVCAPIWEEIVFRGFLLPSLTKYMPLWSAILVSSVAFALAHFNIQRMLPLVFLGIVMGAVFVRSKNLFPSMLLHSLWNAFVFLDLMK 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g04053 404 Pfam Type II CAAX prenyl endopeptidase Rce1-like 311 396 IPR003675 GO:0004222|GO:0016020|GO:0071586
Aip09g04053 404 PANTHER CAAX AMINO TERMINAL PROTEASE 107 402 - -
Aip09g04053 404 PANTHER - 107 402 - -
Aip09g04053 404 Coils Coil 24 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g04053 Aip-Chr9 146786483 146793745 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g04053 K07052 - gmx:100808097 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03936 05 147587780 147589045 Aip09g04053 09 146786483 146793745 ECH
Aip09g04053 09 146786483 146793745 Aip09g04053 09 146786483 146793745 ECH