Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g04043 ATGATGATTCAGTTGAAAAGTGTCACATCGGGCCTAGCACTAGGATTGTTATCATTCAGCCAAGTTGATCTTGAGGTTCTCATTAAGGCTGGCCGTCCTAAAGACAAAAAGAATGCAGAAAGGATTCTACCAGTTGTAAAGAATGGACATTTTGTATTGTGTACCCTCCTTTTAGGTAAATCACTGGCCATGGAGGCACTGCCAATCTTCATGGATCCAATCATGCCGCCTTGGCTTACTATTATTATATCAACTCCCCTGGTCACATTATTTGCAGAGATTGTGCCTCAAGCTGTATATTCTCGATACGGACTAACCTTAGGAGCACAAATGGCACCCTTTGTTCAACTGCTTCTTCTGATCTTCTTCCCTATATCCTATCCAGCTAGTAAGATCCTGGATTGGGCTCTAGGGAAGGAGCATTCAGTCCTGTTGAGAAGATCTGAGTTAAAAACATTTGTGGACTTGCATGCAGACATGGCAGGAAAAGGTGGAGAGTTGTCCTGTCATGAAGCCTCTATAATCACAGGTGCCATGGATTTGACTGATAAGACTGCCAAAGATGCAATGACACCAATATCTGAAACTTTTTCTCTTGATATAAATTCCAAACTGGACATGAATACAATGACATTGATCATGAACAAAGGGCATAGTCGTGTACCTCTATACTCTGGATACCCAAGTAACATCATTGGCCTTATATTGGTTAAGAATTTAATGTTCTGTCGTCCAGAAGATGAAACCCCAATCAAGAATCTGATTATCAGAAAAATTCCCAGCAGGGTTTATGAAAATTGGCCACTGTATGAGATACTGAACCAATTCCAAAAGGGTCACAGCCATATGGCCATTGTTTTGAAATGTGAGAATGACTCAGAGAACAACAATGCTGTAGCCCATGCTGCCGGTGCGCCTACATTTCTCAACACACTCACTAATAAAATATCAAATGCAACACAAAATACTAAAGAATCCGATTCTTCCTTTGATCTGGAAAAGAGTCAGAGAGTTTGTATCTGTGAGTCCAGCGATATAGAATTTAATAGTCCAAGTCCAGCATTTCAGAAGATGATGATGGAGGCAGGCAATGAACAACATCAACATTCCAAAAAGTGGGAGGAAGAGAGTGGTTATACGATGTCACAAGAAGAAATACAAGTTCTTCCAACTGTTTTGGACGAGGAAGTGATAGGAATCATCACAATGGAGGATGTTATGGAGGAACTGTTGCAGGGGGACATACTGGATGAAACTGATGAATATGTTCATGTTCAAAAGAACATCAGGATTAACTTGCTGACTCCACGAAGATCATCCAGGAAAGGATCCGAGTCTAGTCTTCATTGA 1350 0.4089 MMIQLKSVTSGLALGLLSFSQVDLEVLIKAGRPKDKKNAERILPVVKNGHFVLCTLLLGKSLAMEALPIFMDPIMPPWLTIIISTPLVTLFAEIVPQAVYSRYGLTLGAQMAPFVQLLLLIFFPISYPASKILDWALGKEHSVLLRRSELKTFVDLHADMAGKGGELSCHEASIITGAMDLTDKTAKDAMTPISETFSLDINSKLDMNTMTLIMNKGHSRVPLYSGYPSNIIGLILVKNLMFCRPEDETPIKNLIIRKIPSRVYENWPLYEILNQFQKGHSHMAIVLKCENDSENNNAVAHAAGAPTFLNTLTNKISNATQNTKESDSSFDLEKSQRVCICESSDIEFNSPSPAFQKMMMEAGNEQHQHSKKWEEESGYTMSQEEIQVLPTVLDEEVIGIITMEDVMEELLQGDILDETDEYVHVQKNIRINLLTPRRSSRKGSESSLH 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g04043 449 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 4 445 IPR045095 GO:0010960
Aip09g04043 449 CDD CBS_pair_CorC_HlyC_assoc 185 287 IPR044751 -
Aip09g04043 449 PANTHER CBS DOMAIN PROTEIN 4 445 - -
Aip09g04043 449 Gene3D - 171 309 IPR046342 -
Aip09g04043 449 Gene3D - 332 418 IPR046342 -
Aip09g04043 449 ProSiteProfiles CNNM transmembrane domain profile. 1 171 IPR002550 -
Aip09g04043 449 Pfam Cyclin M transmembrane N-terminal domain 3 159 IPR002550 -
Aip09g04043 449 SUPERFAMILY CBS-domain pair 174 288 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g04043 Aip-Chr9 146726959 146729627 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g04043 K16302 - gmx:100791387 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g04043 09 146726959 146729627 Aip09g04043 09 146726959 146729627 ECH