Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g04035 ATGGCAATGGCTTCTCCACTTTCCACTTCAAGCGTGTTGTGCTGGAAATTGAAGGGCACAGGTAGTGGCGCAGTCGCAGTGTGTGCGAAGTCGAATTTGGTGGATTTGTCACGATGGTGTGGTTTGAAGCATGTGGGCATGTCAGCTACGGCGAAGCCCCTTGTTATGAGAGGTAAAAAAGGCAAGGTGGTGTACGCGTCTCTGTTTGGAGTTGGAGCTCCTGAAGCGCTGGTTATTGGGGTGGTTGCTCTATTGGTTTTCGGTCCAAAAGGTCTTGCGGAGGTTGCTCGAAATCTGGGCAAAACGCTTCGTGCATTCCAACCCACAATTAGAGAACTTCAGGATGTTTCCAGGGAGTTTAAGACCACACTGGAACGGGAGATCGGTCTTGACGACATTTCAACTCCACCAAAACAGACCACCTACAATTCTACTCTTGACCCTAATGGCACAAGAGATCCAAGCAAAGCCTACAGCTCTGAGGAGTCTAAAGAAGCCATCCTGCCTCCTCCTGCAACTGCTACGGAGCCACAGTCTCAGAAGCCAGAAACTGACAACTCGCCTCTCGATTCTTCAAGTCAATAG 585 0.4991 MAMASPLSTSSVLCWKLKGTGSGAVAVCAKSNLVDLSRWCGLKHVGMSATAKPLVMRGKKGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDDISTPPKQTTYNSTLDPNGTRDPSKAYSSEESKEAILPPPATATEPQSQKPETDNSPLDSSSQ 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g04035 194 MobiDBLite consensus disorder prediction 134 156 - -
Aip09g04035 194 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATB, CHLOROPLASTIC 5 163 - -
Aip09g04035 194 Pfam mttA/Hcf106 family 71 121 IPR003369 GO:0015031
Aip09g04035 194 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC 5 163 - -
Aip09g04035 194 MobiDBLite consensus disorder prediction 128 194 - -
Aip09g04035 194 MobiDBLite consensus disorder prediction 173 194 - -
Aip09g04035 194 PRINTS Bacterial sec-independent translocation TatB protein signature 68 88 - -
Aip09g04035 194 PRINTS Bacterial sec-independent translocation TatB protein signature 88 107 - -
Aip09g04035 194 Gene3D - 68 116 - -
Aip09g04035 194 TIGRFAM tatAE: twin arginine-targeting protein translocase, TatA/E family 70 115 IPR006312 GO:0016021|GO:0043953
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g04035 Aip-Chr9 146668528 146669340 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g04035 - - adu:107466978 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g04035 09 146668528 146669340 Aip09g04035 09 146668528 146669340 ECH