Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g04007 ATGGTGGTGGTTTCTTCTCAGAACACGGTGGTTAACACCTACCCTCTCTCCAGCTACACTTTCGGCACCAAGGAGCCCAAGATGGAGAAGGACACCTCCGTCGCCGATCGTCTTGCTCGCATGAAAATCAACTATATGAAGGAAGGAATGAGGACCAGCGTCGAAGGAATTTTATTGGTACAAGAACACAATCATCCGCACATACTTCTTCTACAAATTGGAAATACCTTCTGCAAACTCCCAGGTGGTCGCCTCAAGCCAGGAGAGAATGAAGTTGAAGGCTTGAAGAGAAAGTTGACTAGCAAACTCGGTGCTAATTCACCCACTCTTGTGCCTGACTGGCAGATAGGGGAGTGCGTGGCAAACTGGTGGAGGCCTAATTTTGAGACCATAATGTATCCATACTGCCCTCCTCACATAACAAAACCCAAGGAGTGCAAGAAGCTTTTCCTTGTTCACTTGTCTGAGCGCGAATACTTTGCAGTGCCCAAAAACCTAAAACTGCTAGCTGTTCCATTGTTTGAACTCTATGATAATGTTCAGAGATATGGACCAGTTATATCAACCATTCCTCAGCAGCTTTCCAGATTCCAGTTTAAAATGATCACTAATTAA 615 0.452 MVVVSSQNTVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEVEGLKRKLTSKLGANSPTLVPDWQIGECVANWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFKMITN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g04007 204 Pfam Nucleotide hydrolase 11 197 IPR016706 GO:0003729|GO:0005849|GO:0006378
Aip09g04007 204 SUPERFAMILY Nudix 57 156 IPR015797 -
Aip09g04007 204 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 8 186 IPR016706 GO:0003729|GO:0005849|GO:0006378
Aip09g04007 204 PIRSF CPSF-25 1 204 IPR016706 GO:0003729|GO:0005849|GO:0006378
Aip09g04007 204 PANTHER PRE-MRNA CLEAVAGE FACTOR IM 25 KDA SUBUNIT 2-LIKE 8 186 - -
Aip09g04007 204 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 9 201 - -
Aip09g04007 204 ProSiteProfiles Nudix hydrolase domain profile. 50 175 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g04007 Aip-Chr9 146468130 146470555 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g04007 K14397 - gmx:100306068 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g04007 09 146468130 146470555 Aip09g04007 09 146468130 146470555 ECH