Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03990 ATGAAACATACTGGAATTGAACCTACTGTCCTTGGCCTCATATCACAGTTGGATGCTGCTATTGATAAAAAAACTTCAGGAGTTCTTCCTAAGGCCTACTGGGAGTGCATGTTGCATGGATCTCTTTGTCATCTTTCTACTCCTAGTACTACTTTGCTTTCTTGTGCTCTTAGCATAAGAGGAATTATCTGTGTCCTAGATGGGTTATTTAGAATAACAGTAGGAAGAAAGGTTGATTTGGACATCGAAATTTTTGGAAAAATTCTTGATGCTGTAATGATTATCAAGTATGATAGGATATTTAAAGGTATTCATGGGCAATGTGATGCTGTTTATCAAAGCATAAGTGCAGAACTCGAATGGTCAAGTTATGCTGACTTAATTCTAATGAAGCAAATAGAAGGGTTTCTGAAAGACATTAATTCTAGGGGAGAAGTGTTGCATAGAGGAGCAGCAACCATGGTATCCTTAAGCTCTCATTTCCATTCCACCAACTACTACTTGAATAGGAATAATAATTCTCATCACAATCACAATTTCAGAATCAAGCACTATGTTTCATGCTCTGCCCAGCCTACACAAACCAACATTAAGGTAGTGATAAATGGAGCAGCCAAGGAGATAGGAAGAGCAGCAGTGGAAGCTGTGACTAAAGCTAGGGGAATGGAACTTGCTGGTGCTGTAGATACTTGTCATGTTGGGGAAGATATTGGACAGGTATGTGGCATGGAAGAGCCCCTCGAAATACCCATAATAAATAATCTCACTATGGTTTTGGGTTCTATATCTCAGTCCAAGGGAGCAGGAGTTGTAGTTGATTTTACTGAGCCTTCCTCCGTATATGACAATGTAAAACAGGTAACAGCATTTGGCATGAGAAGCGTAGTGCACGTTCCGCGAATGGAATTAGATACGGTTGCAGCATTATCTGCATTCTGTGACAAGGCCACCATGGGTGTGTTGGTTGCACCAACCCTTTCCATAGGATCAATATTGCTACAACAAGCTGCAATCTCAGCTTCTTTCCATTACAGAAACGTTGAGATTGTGGAATCCAAGGCTAATGCAAATGATCTTCCATCAGTAGATGCAAACCAAATAGCAAAGAATCTGTCAAACCTGGGTCAGATCTATAACAGAGAAGATGCTTCAACGGATGTGTTGGCAAGGGGTCAAGTCCTTGGAGATGGAATTCGTGTGCATAGCTTGGTACTTCCAGGACTTCCCTCAAGTACAACAGTTCACTTCTCTGCTCCAGGAGAGATATATTCTATCAAGCATGATATTACAAATGTGCAATGCCTCATGCCAGGCTTGCTGTTAGCCATTAGAAAAGTTGTGCGCCTCAAGAATTTGGTGTATGGCTTGGAGAAGTTTTTGTAA 1383 0.41 MKHTGIEPTVLGLISQLDAAIDKKTSGVLPKAYWECMLHGSLCHLSTPSTTLLSCALSIRGIICVLDGLFRITVGRKVDLDIEIFGKILDAVMIIKYDRIFKGIHGQCDAVYQSISAELEWSSYADLILMKQIEGFLKDINSRGEVLHRGAATMVSLSSHFHSTNYYLNRNNNSHHNHNFRIKHYVSCSAQPTQTNIKVVINGAAKEIGRAAVEAVTKARGMELAGAVDTCHVGEDIGQVCGMEEPLEIPIINNLTMVLGSISQSKGAGVVVDFTEPSSVYDNVKQVTAFGMRSVVHVPRMELDTVAALSAFCDKATMGVLVAPTLSIGSILLQQAAISASFHYRNVEIVESKANANDLPSVDANQIAKNLSNLGQIYNREDASTDVLARGQVLGDGIRVHSLVLPGLPSSTTVHFSAPGEIYSIKHDITNVQCLMPGLLLAIRKVVRLKNLVYGLEKFL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03990 460 Pfam Dihydrodipicolinate reductase, N-terminus 197 324 IPR000846 GO:0008839|GO:0009089
Aip09g03990 460 TIGRFAM dapB: 4-hydroxy-tetrahydrodipicolinate reductase 197 460 IPR023940 GO:0008839|GO:0009089
Aip09g03990 460 Pfam Dihydrodipicolinate reductase, C-terminus 333 460 IPR022663 GO:0008839|GO:0009089
Aip09g03990 460 PANTHER DIHYDRODIPICOLINATE REDUCTASE 179 460 IPR023940 GO:0008839|GO:0009089
Aip09g03990 460 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 196 351 IPR036291 -
Aip09g03990 460 PANTHER DIHYDRODIPICOLINATE REDUCTASE-LIKE PROTEIN CRR1, CHLOROPLASTIC 179 460 - -
Aip09g03990 460 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 327 431 - -
Aip09g03990 460 Gene3D - 196 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03990 Aip-Chr9 146345588 146350984 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03990 K16908 - gmx:100782083 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03990 09 146345588 146350984 Aip09g03990 09 146345588 146350984 ECH