Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03979 ATGAAGATGGGTGGTTCATCATCCTCGCGTGTAGTGGAATCAGCAACATGGTTCTGTGTGGTGGTGTTGGTGGGTATGATAATGTTGGGGTCCATAAGGGTTGATGATGATGGTGGTGGTGTTGTAAAAGGGGAGAAGCTGGGAAAGAGAAGGGTGTGTGATGAGATATATGTTGTGGGAGAAGGGGAGACACTTCACACAATCAGTGAAAAGTGCAGTGATCCCTTCATTGTTGAGAGGAATCCACATATCCATGATCCTGATGATGTTTTCCCTGGCCTTGTTATCAAAATCATCCAACACCTACCAACCACAACATACACATCATAA 330 0.4485 MKMGGSSSSRVVESATWFCVVVLVGMIMLGSIRVDDDGGGVVKGEKLGKRRVCDEIYVVGEGETLHTISEKCSDPFIVERNPHIHDPDDVFPGLVIKIIQHLPTTTYTS 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03979 109 Gene3D LysM domain 51 108 IPR036779 -
Aip09g03979 109 CDD LysM 56 98 IPR018392 -
Aip09g03979 109 PANTHER PROTEIN, PUTATIVE-RELATED 6 101 - -
Aip09g03979 109 PANTHER EMBRYO SAC 1 6 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03979 Aip-Chr9 146217837 146218531 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03979 - - mesc:110617959 133.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03979 09 146217837 146218531 Aip09g03979 09 146217837 146218531 ECH