Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03978 ATGGGTTGGGGTTTGAAGACATTTAAATGCTCATTTCTTATTTGGAGCCTTTTCTTTATTAGTTTATCTTATTCTGAAAATTTTGATTTTGAAAAAGCTCCAAAGTTCAAGTTTGTGAAAGAAGCAACTTTGGCACCACCAATCTTATATTATGATTATATAATAATTGGTGGAGGAACATGTGGTTGTCCACTAGCAGCAACACTTTCACAAGGTGCAAGAGTTTTAGTCCTTGAAAGGGGTGGTTCACCATACACAAACCCAGAGAAGATCAACATATACAACTTTGTCAGTGCACTATCTGACATAAGCCCTTCAGCATTTGCACAGCAATTCATATCAAGGGATGGTGTCCTAAATGCAAGGGCACGTGTCCTTGGTGGTGGTTCTGTCCTAAATGCAGGATTCTACTCAAGAGCTAGTTTAAGGTACATAATGGAATCCGGGTGGAATGAAACTCTGGCAAAGATTGCATATAAATGGGTTGAGAAGAAGGTGGCTTTTAAGCCTACACTGCTGCAGTGGCAAGCAGCAGTGAAGGATGCATTACTTGAAGTTGGGGTGCTACCTTACAATGGCTTCACTCTTGATCACCTTTATGGGACTAAGATTGGAGGCACCATCTTTGACAAGGATGGTAATAGGCACACTGCTGCTGACTTGTTAGAGTATGCTGATCCAAGGAGGATTTCTGTTTATGTCCATGCCACAGTCCACAAGATACTCTTTAGATACAATATAGAAAGAAGGAGGCCTCAAGCTTATGGAGTGATTTTCAAAGATGCATTAGGAAAAATGCACAAAGCATACTTAGGAAAGAGGTCAAAAAATGAGATAATTGTATCAGCTGGGGCCCTTGGAAGCCCACAGATACTGATGCTGAGTGGAATTGGGCCTGCAAGCCATCTGAAGGCCCATGGAATCAAGGTGGTTTTGGACCAGCCTCTGGTTGGCAAAGGTATGGCAGATAATCCAATGAATGTGTTGGTGGTTCCTTCTCCTTTACCTGTTGAAGTGTCTCTGATCCAAACAGTTGGAGTCACCAAGTTCGGTAGCTTCATTGAAACAGCCAGTGGATTGAGCATAGGTCATTCTTGGGCTGAAAGGCTTCAAGGGATCTTTGAATTTGTGTCCAACCAGAGTGGGAAACCATCATCAGTGATGTATCCACCAGAAACAAAGGAGGAGAGTGTTGGAGACACCATAAGATCACTATCCAATCCAATTCTGAAAGGAGGAGTCATCCTTGAAAAGATCATAGGACCAAGATCAACAGGGCATCTAGAACTCGTTACCACTAATCCCAATGACAACCCTTCAGTTACCTTCAACTATTTCAAGGATCCAGAAGACCTAAAGAAGTGTGTTCTTGGCATGAAAACAATCATAGATGTCATCAACTCCAAATCATTCTCAAAGTTCAGGTTCAAGAACATGCCTGTGGAAGCTCTCATTGACTTGATGTATCACATACCAATGAACTTGAGACCAAAGCATGCCTCTCCTACCCTTTCTTTAGAACAGTATTGCATAGACACTGTCTTAACTATCTGGCATTACCATGGAGGATGCCAAGTTGGAAAAGTTGTTGATCTTAATTACAGGGTTCTTGGTGTTGATGCTTTGAGAGTTATTGATGGATCCACCTTTTATCGCTCTCCAGGGACTAATCCTCAAGCTACTGTTATGATGCTTGGAAGATACATGGGAGAGAAGATTTTAAGGAAAAGATACTTCCCTGCAAAGAAGTGA 1752 0.4178 MGWGLKTFKCSFLIWSLFFISLSYSENFDFEKAPKFKFVKEATLAPPILYYDYIIIGGGTCGCPLAATLSQGARVLVLERGGSPYTNPEKINIYNFVSALSDISPSAFAQQFISRDGVLNARARVLGGGSVLNAGFYSRASLRYIMESGWNETLAKIAYKWVEKKVAFKPTLLQWQAAVKDALLEVGVLPYNGFTLDHLYGTKIGGTIFDKDGNRHTAADLLEYADPRRISVYVHATVHKILFRYNIERRRPQAYGVIFKDALGKMHKAYLGKRSKNEIIVSAGALGSPQILMLSGIGPASHLKAHGIKVVLDQPLVGKGMADNPMNVLVVPSPLPVEVSLIQTVGVTKFGSFIETASGLSIGHSWAERLQGIFEFVSNQSGKPSSVMYPPETKEESVGDTIRSLSNPILKGGVILEKIIGPRSTGHLELVTTNPNDNPSVTFNYFKDPEDLKKCVLGMKTIIDVINSKSFSKFRFKNMPVEALIDLMYHIPMNLRPKHASPTLSLEQYCIDTVLTIWHYHGGCQVGKVVDLNYRVLGVDALRVIDGSTFYRSPGTNPQATVMMLGRYMGEKILRKRYFPAKK 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03978 583 Gene3D - 168 516 - -
Aip09g03978 583 SUPERFAMILY FAD/NAD(P)-binding domain 50 577 IPR036188 -
Aip09g03978 583 PANTHER OSJNBA0019K04.7 PROTEIN 11 577 - -
Aip09g03978 583 SUPERFAMILY FAD-linked reductases, C-terminal domain 321 523 - -
Aip09g03978 583 Pfam GMC oxidoreductase 422 567 IPR007867 GO:0016614
Aip09g03978 583 Pfam GMC oxidoreductase 51 325 IPR000172 GO:0016614|GO:0050660
Aip09g03978 583 ProSitePatterns GMC oxidoreductases signature 2. 284 298 IPR000172 GO:0016614|GO:0050660
Aip09g03978 583 Gene3D - 51 566 IPR036188 -
Aip09g03978 583 PIRSF Alcohol_oxidase 40 579 IPR012132 GO:0050660
Aip09g03978 583 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 11 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03978 Aip-Chr9 146214230 146216436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03978 12 577 Miscellaneous Gene Families AT5G51950 60.633 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03978 - - gmx:100780453 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03978 09 146214230 146216436 Aip09g03978 09 146214230 146216436 ECH