Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03968 ATGGCGTTCTCTTCTTCTATGATTAACAGCTTCATCCTCTCTTCCTTTAAACCCCAACAATCCATCCTCTCTTTTCCCTCCAGCTCGTATGGTGATTCCTTCAAACCTCGAAAGCCTCTTCTTCCCTTCAGAATCCGCTCTGTTCCAACGTTAATAAGAGCCACTTCATCGTCATCCTCTTCTTCTCCCGCAACCATTGCCGAACCTGAAGGCATTAAGATTAATTCAATTCCAACCAAACCAATCGAAGGGCAAAAGACCGGTACCAGTGGACTTCGAAAAAAGGCACTGTTTAATTCCTTGCCTCCAGAGGATTACAAGAATGGTGTATTGGTGTTGGGAGGTGATGGTCGATACTTCAACCGGGAAGCTGCGCAGATTATAATCAAAATTGCTGCCGGGAATGGTGTCGGAAAAATTTTGGTTGGACAGGAAGGTATATTGTCAACACCAGCTGTTTCTGCTGCAAATGGTGGATTTATTATGAGTGCTAGCCATAATCCTGGAGGGCCGGAATATGATTGGGGTATTAAGTTTAATTACAGTAGTGGACAGCCTGCTCCGGAATCCATCACTGACAAGATTTATGGAAACACACTATCTATATCTGAGATAAAGATCGCTGACATTCCTGATGTTGACTTATCAAAAACTGGGGTTACAAAGTTTGGAAGCTTCAGTGTTGAAGTAATAGACCCTGTGTCTGACTATTTGGAGCTACTGGAGAGTGTATTTGATTTTCAGCTAATAAGGAGTCTTATATCAAGGCCAGATTTTAGGTTTACATTTGATGCAATGCATGCAGTTACTGGCGCTTATGCCAAACCTATTTTTGTTGATAAACTTGGTGCAAGTCCGGATTCAATCGCAAATGGAATCCCTTTGGAAGATTTTGGACATGGTCATCCTGATCCTAATCTAACGGCTGTTTTAGCTTGGCTTTCTATTATTGCGCACCGCAACAAAGACAAGAAGGCAGGGGAGAAACTGATCTCTGTGGCTGATGTTGTGAAGGAACACTGGGCAACTTATGGAAGAAATTTCTTTTCTAGATATGACTATGAGGAATGTGAATCTGAAGGTGCCAATAAAATGGTAGCATACCTACGAGAGACTGCATCAAAGAGCAAGACTGGTGATAAGTATGGAAGCTATGTCCTCCAATTTGCAGATGACTTCACATACACTGATCCTGTAGACGGAAGCGTGGTATCAAAACAAGGCGTTCGGTTTGTTTTTACTGATGGCTCGAGGATTATATATCGTTTATCAGGAACTGGTTCTGCAGGTGCAACTGTTAGAGTTTACATTGAACAGTTTGAACCTGATGCCTCCAAACATGACCTTGATGCTCAAGTTGCCTTAAAACCATTAATAGATTTAGCACTATCTCTGTCAAAGCTCAAAGACTTCACAGGGAGGGAGAAGCCTACAGTGATCACATAA 1446 0.4225 MAFSSSMINSFILSSFKPQQSILSFPSSSYGDSFKPRKPLLPFRIRSVPTLIRATSSSSSSSPATIAEPEGIKINSIPTKPIEGQKTGTSGLRKKALFNSLPPEDYKNGVLVLGGDGRYFNREAAQIIIKIAAGNGVGKILVGQEGILSTPAVSAANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKIADIPDVDLSKTGVTKFGSFSVEVIDPVSDYLELLESVFDFQLIRSLISRPDFRFTFDAMHAVTGAYAKPIFVDKLGASPDSIANGIPLEDFGHGHPDPNLTAVLAWLSIIAHRNKDKKAGEKLISVADVVKEHWATYGRNFFSRYDYEECESEGANKMVAYLRETASKSKTGDKYGSYVLQFADDFTYTDPVDGSVVSKQGVRFVFTDGSRIIYRLSGTGSAGATVRVYIEQFEPDASKHDLDAQVALKPLIDLALSLSKLKDFTGREKPTVIT 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03968 481 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 95 203 IPR005844 GO:0005975|GO:0016868
Aip09g03968 481 Gene3D - 244 331 - -
Aip09g03968 481 SUPERFAMILY Phosphoglucomutase, C-terminal domain 346 481 IPR036900 GO:0016868|GO:0071704
Aip09g03968 481 Gene3D - 332 481 - -
Aip09g03968 481 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 56 308 IPR045244 GO:0004614|GO:0005975
Aip09g03968 481 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 159 168 IPR016066 GO:0000287
Aip09g03968 481 SUPERFAMILY Phosphoglucomutase, first 3 domains 74 265 IPR016055 GO:0005975|GO:0016868
Aip09g03968 481 PRINTS Phosphoglucomutase/phosphomannomutase family signature 294 307 IPR005841 GO:0005975|GO:0016868
Aip09g03968 481 PRINTS Phosphoglucomutase/phosphomannomutase family signature 158 172 IPR005841 GO:0005975|GO:0016868
Aip09g03968 481 PRINTS Phosphoglucomutase/phosphomannomutase family signature 258 277 IPR005841 GO:0005975|GO:0016868
Aip09g03968 481 PANTHER PHOSPHOGLUCOMUTASE, CHLOROPLASTIC 308 481 - -
Aip09g03968 481 PANTHER PHOSPHOGLUCOMUTASE, CHLOROPLASTIC 56 308 - -
Aip09g03968 481 Gene3D - 94 243 - -
Aip09g03968 481 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 308 481 IPR045244 GO:0004614|GO:0005975
Aip09g03968 481 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 404 456 IPR005843 GO:0016868|GO:0071704
Aip09g03968 481 SUPERFAMILY Phosphoglucomutase, first 3 domains 235 312 IPR016055 GO:0005975|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03968 Aip-Chr9 146127306 146132764 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03968 K01835 - gmx:100802730 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03968 09 146127306 146132764 Aip09g03968 09 146127306 146132764 ECH