Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03959 ATGGCCAAAGTTCTTCAAACTTCTGGTCAAAGCGAAGAGACTTCCCTCCCTCCTTCACTGCACTACATTCCTCCGAAAACAGACCAAAATGAAGCCTTAACAGAGGTTCACATGGTTCTCTTCCCCATCCTTGATGACCTCTTTGCAAAAACCAATGTTTCACCCCTTGACATAGACATACTCATAGTTAACTGCAGTGGCTTTTGTCCCTCTCCTTCTCTGGCCTCCATTGTCATCAACAAATACTCCATGAGAACTGACATCAAGAGCTTCAACATCTCCGGCATGGGGTGCAGTGCAAGCGCACTATGCATAGACATGGCACAGAATCTTCTGAGAGTTAACAAGAACTCAAACGCCATTGTTCTCAGCACAGAGATTCTCTCAACAGGTTGGTATTCAGGGAACGAAAAGTCAAAGTTGGTCATCAACTGCCTCTTCAGGATGGGAAGCGCCGCCATTCTTCTCTCGAACAAGAAAGAAGCAAAGAAGCACGCAAAATACAGGGTGCTTAGGACGCTAAGAACACAAAGAGCCTTCGAAGACAAAGCTTATGTTTCTGCCATAAGAGAAGAAGATTCAGAAGGGAAGCTGGGAGTTACCCTGAAGAGGGACTTGCTTCAAGTAGCCGGTGAGACCCTTCGTTCAAACATCACGATTCTTGGCTCTGAGATCTTGCCTTTGTTTGAGAAGTTTCGGTATTTTGCTTCCCTGATGAAGAAGAGGTTCTTGTTGACAAAGTCTGAAGGGATCTACGTTCCGAACTTCAAGACGGTGATACAGCATTTCTGCATGCCGTGTTCTGGGAGGTCAGTAATCATGGAAGTGGGGAAAGGCTTGAAGCTTGGGGAGAGAGAGATGGAACCGGCATTGATGACTCTTCACAGGTTCGGGAACCAGTCTTCTTCATCTCTCTGGTACGAACTTGCTTACTTGGAAGCCAAGGAACGGGTTCACAAAGGTGACAGAATATGGCAACTCGGTATGGGTAGTGGGCCCAAATGCAACAGTGTTCTCCTCCAATGTGTCAGGCCCATCATTGCTGAGTCCAACAAGGGCCCATGGGCTGACTGCATCCATCGATACCCCTTATGGGTTAATGATTCTTCAACACCTTAG 1119 0.4692 MAKVLQTSGQSEETSLPPSLHYIPPKTDQNEALTEVHMVLFPILDDLFAKTNVSPLDIDILIVNCSGFCPSPSLASIVINKYSMRTDIKSFNISGMGCSASALCIDMAQNLLRVNKNSNAIVLSTEILSTGWYSGNEKSKLVINCLFRMGSAAILLSNKKEAKKHAKYRVLRTLRTQRAFEDKAYVSAIREEDSEGKLGVTLKRDLLQVAGETLRSNITILGSEILPLFEKFRYFASLMKKRFLLTKSEGIYVPNFKTVIQHFCMPCSGRSVIMEVGKGLKLGEREMEPALMTLHRFGNQSSSSLWYELAYLEAKERVHKGDRIWQLGMGSGPKCNSVLLQCVRPIIAESNKGPWADCIHRYPLWVNDSSTP 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03959 372 Gene3D - 3 342 IPR016039 GO:0016746
Aip09g03959 372 SUPERFAMILY Thiolase-like 147 344 IPR016039 GO:0016746
Aip09g03959 372 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 260 341 IPR013747 -
Aip09g03959 372 SUPERFAMILY Thiolase-like 3 162 IPR016039 GO:0016746
Aip09g03959 372 CDD CHS_like 11 340 - -
Aip09g03959 372 MobiDBLite consensus disorder prediction 1 17 - -
Aip09g03959 372 MobiDBLite consensus disorder prediction 1 23 - -
Aip09g03959 372 Pfam FAE1/Type III polyketide synthase-like protein 1 242 IPR013601 GO:0006633|GO:0016020|GO:0016747
Aip09g03959 372 PANTHER 3-KETOACYL-COA SYNTHASE 1 364 - -
Aip09g03959 372 PANTHER 3-KETOACYL-COA SYNTHASE 1 364 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03959 Aip-Chr9 146019528 146020927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03959 3 366 Miscellaneous Gene Families AT1G25450 48.901 1.31e-134 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03959 K15397 - gmx:100818350 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03959 09 146019528 146020927 Aip09g03959 09 146019528 146020927 ECH