Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03958 ATGCCTAGAAACAGAACAGCATGGTGCTATTCTTTCTTAGTTACACTATTAATCAAACTCAGCATTATTTCTTCTTTTTCTCATAAACTACCAACACCACCACCATTGCCAATTCTGCCACTCCCATCATATTCACAGTTAAAATGGCAACAAAGAGAGATCATAATGTTCCTCCACTTTGGAGTCAACACATTCACAGATAGAGAATGGGGAACAGGCCACGAAAACCCTACAGTATTCAACCCTTCTGGACTCAACACAAAACAATGGGCCAAGGTGGCAGCAGAGGCAGGAATCTCATTGATGATACTAACTGCAAAGCACCATGATGGATTCTGCCTCTGGCCTTCAAAGTACACTGACCATTCTGTCATTAACAGTCCCTGGAAATCTGGCAATGGTGATGTGGTTCAAGAATTTGTTGATGCTGCCACACTGCAAGGAATCGATGTAGGGATCTATCTTTCTCCGTGGGATCGACACGAACCGCGCTACGGCCATGATGTTGCCTACAATGAATACTACTTGGCTCAACTGCAAGAGTTGCTCAACAAGTACAAAAATGTTAGAGAAATATGGTTTGATGGAGCAAAGGATCCAAAGTCACAGAATGTGTCATATTATTTCTCAGATTGGTTCTCAATGGTGAAGGAGTTGCAGAGTTCCATCAATATCTTCTCTGATGCTGGTCCTGATGTTAGGTGGGTGGGAGATGAAACAGGAAGTGCTGGCTACACTTGTTGGTCTACCATTAACCGAACTTCTCTATCAATTGGAGCCCCAAACATCTCTCAATACTTAAGCACTGGTGATCCAAGAGGAACAGACTGGCTACCAGCTGAATGTGATGTTTCAATTAGGCCAGGGTGGTTTTGGCACAAATCAGAATCACCAAAAAGGCTAAGTGAACTTCTTGACATTTATTACAATTCAGTGGGGAGGAACTGTGTGTTACTTCTAAATGTACCTCCAAATACAACTGGCCTTGTATCTGATGATGATGCTCATAGATTAAAAGAGTTTAGAAATGCAATTAACACAATCTTCAATAAAAATCTAGCTGAGGATTTTTACATTAAGGTTAGTAGTCAAAGGAGTGCAGAATTTGGGCCAGAAAAGTTGCTAGATAAGGACCACTTATGGTCATATTGGGCACCAAGTGCTGATGATGGTGAAAAGGATCACTGGATTGAAATTTGGACCAATGATGGAGGGTTGAGATTCAATGTGATTAGGGTGCAGGAAGCAATTGGACTTGGTCAGCGGATCCAACGGCACGAAATCTATGTGGATGGTAAATTGATGATCCAAGGGACAACTGTGGGATACAAGAGGCTTCATAGGCTTGATGTAGATGTGGTGCAAGCACGTCTTGTGAGGATTAAGATCACAAAGGCAAGAGGGTTGCCCTTAATTTCTTCTATTGGATTGCATTTTGATCCTTATTGGCATTCTAAGTTTACTGCCAACTGA 1473 0.4196 MPRNRTAWCYSFLVTLLIKLSIISSFSHKLPTPPPLPILPLPSYSQLKWQQREIIMFLHFGVNTFTDREWGTGHENPTVFNPSGLNTKQWAKVAAEAGISLMILTAKHHDGFCLWPSKYTDHSVINSPWKSGNGDVVQEFVDAATLQGIDVGIYLSPWDRHEPRYGHDVAYNEYYLAQLQELLNKYKNVREIWFDGAKDPKSQNVSYYFSDWFSMVKELQSSINIFSDAGPDVRWVGDETGSAGYTCWSTINRTSLSIGAPNISQYLSTGDPRGTDWLPAECDVSIRPGWFWHKSESPKRLSELLDIYYNSVGRNCVLLLNVPPNTTGLVSDDDAHRLKEFRNAINTIFNKNLAEDFYIKVSSQRSAEFGPEKLLDKDHLWSYWAPSADDGEKDHWIEIWTNDGGLRFNVIRVQEAIGLGQRIQRHEIYVDGKLMIQGTTVGYKRLHRLDVDVVQARLVRIKITKARGLPLISSIGLHFDPYWHSKFTAN 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03958 490 Gene3D - 360 478 - -
Aip09g03958 490 PRINTS Glycosyl hydrolase family 29 signature 101 117 IPR016286 GO:0004560|GO:0006004
Aip09g03958 490 PRINTS Glycosyl hydrolase family 29 signature 149 168 IPR016286 GO:0004560|GO:0006004
Aip09g03958 490 PRINTS Glycosyl hydrolase family 29 signature 303 324 IPR016286 GO:0004560|GO:0006004
Aip09g03958 490 Pfam Alpha-L-fucosidase 76 341 IPR000933 GO:0004560|GO:0005975
Aip09g03958 490 PANTHER OS09G0520800 PROTEIN 25 487 - -
Aip09g03958 490 SUPERFAMILY (Trans)glycosidases 35 346 IPR017853 -
Aip09g03958 490 SMART alpha_l_fucos 39 374 IPR000933 GO:0004560|GO:0005975
Aip09g03958 490 SUPERFAMILY Galactose-binding domain-like 350 467 IPR008979 -
Aip09g03958 490 Gene3D Glycosidases 37 355 - -
Aip09g03958 490 PANTHER ALPHA-L-FUCOSIDASE 25 487 IPR000933 GO:0004560|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03958 Aip-Chr9 146008380 146010941 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03958 K01206 - gmx:100775293 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03958 09 146008380 146010941 Aip09g03958 09 146008380 146010941 ECH