Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03954 ATGGAATCCGTTTTAAGCTTCAACAAGATGATAATGAAGCCACTGGCACCGAAGGGGTTTGCTGAGAGCAACATAGCAGCAAGGAAGAAGAGTCGCATGGCGGTGGTTGTGAAAGCAGAGGGTGCGGGTGTTGGTGTTGGAATCAACCCTGATATCAGGAAGACTGAGGAGAAGGTTGTGGACTCTGTTGTTGTCTCTGAACTCTCTAAACCCCTCACTCCCTATTGCAGATGTTGGAGATCAGGAACTTTTCCTCTGTGCGACGGAAGCCATGTAAAGCATAACAAGGCCACTGGGGATAACGTTGGACCTCTGCTTCTGAAAAAGTAG 330 0.4848 MESVLSFNKMIMKPLAPKGFAESNIAARKKSRMAVVVKAEGAGVGVGINPDIRKTEEKVVDSVVVSELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03954 109 PANTHER CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1 16 109 - -
Aip09g03954 109 SMART znf_cdgsh 58 97 IPR018967 GO:0043231|GO:0051537
Aip09g03954 109 PANTHER CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1 16 109 IPR045131 GO:0010506|GO:0051537
Aip09g03954 109 Gene3D - 64 109 IPR042216 -
Aip09g03954 109 Pfam Iron-binding zinc finger CDGSH type 63 91 IPR018967 GO:0043231|GO:0051537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03954 K23882 - gmx:100783951 129.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03954 09 145989573 145990469 Aip09g03954 09 145989573 145990469 ECH