Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03953 ATGGCGCAGACCGGCAAAGTTCGCTGCCAGAGGATTGGTTGTGACGCCATCTTCTCCGACGACGATAACCCTGACGGTTCCTGTCGATATCATGATTCTGGACCAATCTTTCATGATGGGATGAAAGAATGGAGCTGTTGCAAGAAAAGAAGTCATGATTTCAGCCTGTTTTTGGAAATTCCAGGATGTAAGACCGGAAAACATACATCCGAAAAGCAAGTGATTGCACCGGTTAAGAAGGCTACTGTGGCTGCTCCAACTGCAGCTCCTTCAACCAATGCATCGGCAAAGGACTCTTGTTCTAGGTGTCGGCAGGGATTCTTTTGCTCAGATCATGGTTCACAAGTCAAACCTGTAAATACTGTTGGAGACAACCCTGGAAGTGTTGCCGGACATGTCTGCGCTGAGACCAATTCAAGTGTTCAGGATCCAAAGGATCCTAAGAAGATAGTCGATATAAACGAGCCCCAAGCGTGTAAAAATAAAGGGTGCGGCCAAACTTTCAAGGAGAAGGATAATCATGAGACTGCTTGCAGCTACCATCCTGGCCCCGCGGTGTTTCACGACCGGATGAGAGGGTGGAAGTGCTGTGACATTCACGTGAAAGAATTTGATGAGTTTATGAGTATTCCTCCATGCACAAAGGGATGGCATAATGCTGACCCTGATCAATGA 675 0.4726 MAQTGKVRCQRIGCDAIFSDDDNPDGSCRYHDSGPIFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTSEKQVIAPVKKATVAAPTAAPSTNASAKDSCSRCRQGFFCSDHGSQVKPVNTVGDNPGSVAGHVCAETNSSVQDPKDPKKIVDINEPQACKNKGCGQTFKEKDNHETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCTKGWHNADPDQ 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03953 224 ProSiteProfiles CHORD domain profile. 9 68 IPR007051 -
Aip09g03953 224 PANTHER CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN RAR1 3 222 IPR043316 -
Aip09g03953 224 Pfam CHORD 158 218 IPR007051 -
Aip09g03953 224 Pfam CHORD 8 68 IPR007051 -
Aip09g03953 224 ProSiteProfiles CHORD domain profile. 159 218 IPR007051 -
Aip09g03953 224 Gene3D - 151 221 - -
Aip09g03953 224 Gene3D - 1 72 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03953 K13458 - gmx:100194419 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03953 09 145984221 145987361 Aip09g03953 09 145984221 145987361 ECH