Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03828 ATGGCGATGCAGGGCAATACAAGCCCTTGCATCGAAGAAGTAGCAAAAGATGGGTATGACTCTAATAAATTTGATGACGATGGTCATCCAAAACGAAAAGGAACATGGGTAACTGCGAGTGGACATATTTTGACGGCTGTTATAGGCTCAGGGGTGCTATCTCTTGCATGGGCCATTGCCCAGTTGGGTTGGATTGCAGGACCCATTGTCCTCATGCTCTTCTCAGTCATCACTCTCTACACTTCTTTTCTCCTCACCGATTGTTATAGGTCCCCTGACCCTGTTCATGGAACCAGGAACCGCACCTATAGGAACATGGTCAAGAATATTCTAGGAGGAACTCAACACCATTATTGTGGATTGGCTCAATACATAAATCTGATTGGAGCAAGCATTGGATATACTATCACTGCAGCCATTAGTATGGTGGCCATACAAAGATCCAATTGTTATCACAAAAATGGGCATGATGCAGTGTGTACTATGCCAAATTACCCTTATATGATCATGTTTGGGATCATAGAGATTATCTTAAGCCAAATCCCAGACTTCCATGAACTTTCATGGCTCTCTGCTCTTGCTGCTATCATGTCTTTTGGTTATGCTACCATAGGGATTGGTCTCTCCATAGCCAAAGTTGCAGGGGGAAGCCATGCCAGAACAAGCCTTACCGGGGTTACCATTGGAGTGGATGTGACAAGCAGCGAGAAGCTATGGAATACTTTTACAGCTTTGGGAAACATTGCTTTTGCATATAGCTTCAGTTCTGTCATTGTTGAGATACAGGATACATTGAAATCGGGTAAACCGGAGAACCGAGTGATGAAGGTGGCTGCTTCTACATCAGTGGCAGTCACCACTGTGTTCTATATGCTATGTGGTATGATAGGCTATGCAGCGTTTGGGAACGATGCACCTGGAAACTTCTTAACAGGATTTGGTTTCTATGAGCCATTTTGGCTTATTGACATTGGTAACATTTTCATCGTCGTTCATCTCGTCGGCGCCTACCAGGTGTACACACAGCCCGTGTTTTTGCTGGTGGAAAATTGGTGCAAGGAGCGTTGGCCTGAAAGCAGCTTCATGGCAAAAGAGCATCACATAAAGATTCCATTGGTTGGAACCTATAGAATGAATCCATTCAGGCTAATATGGAGGACATTGTATGTGATATTGTCAGCAGTGATTGCTATATTACTTCCTTTCTTCAACAGCATTGTTGGTTTGCTTGGAGCTCTTGCATTCTGGCCATTGACAGTGTACTTTCCAACAAAGATGTACATGGTACAATCTAAAGTGCCAAAGTTCTCTATGAGATGGACAGGGTTGAAGTTGCTAAGTGTGTTCTGCTTGCTGATTTCAATTGTTGCTGCAGCTGGATCAATTGAAGGAATTATTAAAGAACTTAAAGTTTACAAGCCATTCTAG 1428 0.4328 MAMQGNTSPCIEEVAKDGYDSNKFDDDGHPKRKGTWVTASGHILTAVIGSGVLSLAWAIAQLGWIAGPIVLMLFSVITLYTSFLLTDCYRSPDPVHGTRNRTYRNMVKNILGGTQHHYCGLAQYINLIGASIGYTITAAISMVAIQRSNCYHKNGHDAVCTMPNYPYMIMFGIIEIILSQIPDFHELSWLSALAAIMSFGYATIGIGLSIAKVAGGSHARTSLTGVTIGVDVTSSEKLWNTFTALGNIAFAYSFSSVIVEIQDTLKSGKPENRVMKVAASTSVAVTTVFYMLCGMIGYAAFGNDAPGNFLTGFGFYEPFWLIDIGNIFIVVHLVGAYQVYTQPVFLLVENWCKERWPESSFMAKEHHIKIPLVGTYRMNPFRLIWRTLYVILSAVIAILLPFFNSIVGLLGALAFWPLTVYFPTKMYMVQSKVPKFSMRWTGLKLLSVFCLLISIVAAAGSIEGIIKELKVYKPF 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03828 475 Pfam Transmembrane amino acid transporter protein 32 466 IPR013057 -
Aip09g03828 475 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 19 471 - -
Aip09g03828 475 PANTHER OS05G0424000 PROTEIN-RELATED 19 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03828 Aip-Chr9 144874598 144877398 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03828 20 475 Organic Solute Cotransporters AT5G49630 63.834 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03828 K24917 - gmx:100795817 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03828 09 144874598 144877398 Aip09g03828 09 144874598 144877398 ECH