Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03822 ATGAAGCTGAGAGTCAGATCCCTGGAATCCAAAGAAACCCTAAAGATCGAAGTCCCCAATTGCTGTTCATTGCAGCAACTCAAAGACACCATTTCACATGTCATATCCTCATCTTCATCTTCTTCTCTTCATCTATCCCTCAACAGGAAGGACGAAATCCACGCTTCCTCGCCCGACGACTCCATCCAATCTCTAGGCATCGCCTCCGGAGACCTCGTCTTCTACACCCTCAACCCCACCGCCTTCTCCCCCGAAACTCAAACCCTCCTTCACAAACCCACCCCACAAGAACCGTTCAATTCATGCGACGTGCCCTCGATTCAACACTCTTCTGAAATCCTCATGGTTGACGCTCCCTCGATTCCCGAGGCGGAAAAAATTCCGTCTTTGGAGTCTTCAACTGCGGAAACCGTCGATATGGCTGATGGGTCTGGTGGAGAGGAAGTGGTTGTCAGGAAGACCAATTCCGAAGCTTCGTTCGTCAAAAGGGTGTTGAAAGAAGCGAATGGAAATGACGTTACCGACCTCAAGTTGTTGGTTCTCGTGGTACATGCTGTTATTCTGGAATCTGGGTTCGTTCGTGCTGAAAAGATTTCGCCTTTGGGGGTTGGTTCCTCTCATATTCTGGATGAGTGGCCTTCAGCTTCAGCTTCTTCGATATCGTTGAGGGTGTCTTTGGATAAGCGTAAATTTGCCAAGCCCTTGAAGTTGATGCTGGAAAATTTTGAATCCAAGGATAATTTTGATGATGATGCTGTTGTTGATCAACAAAGTGAGATTTTTGAGTTGTGGAAGATGGTGAAGGATAGGCTTGCATTGCCATTATTGATTGATCTTTGTGACAAAGCTGGATTGGATCCTCCACCGTGTTTTATGAGGCTCCCCACAGAACTTAAGATCATGATTTTGGAGCGTCTTCCTGGTGTTGATGTGGCCAGGGTGGCTTGCTTGTGTACAGAACTGCAATACCTGTCTGGCAATAATGACCTCTGGAGGAAGAAGTTTGAGGAGGAGTTTGGAGTTGCTGGGTGTAGAGCGGTGTTCTTTAAGGAGTTTTTTGCTTTACACTGGGAAACAAGGAAGAGATCGATGCGACCGGTTTTTCCTATTCAAATGAGGCAACGACCTTATGCATTATTCCCAGCAAGGAGGGACCGTAATCCTTTTGGAATACCTTCAATTGTGGGTGGAGACTATGATCGGCTCCCAGGATTCGGTCTACAATTCCCTACATACTCACCAAGGCGGACTTTCCTCCCACCGTGTCACCGTGGAGGATTCCATCACTAG 1290 0.4736 MKLRVRSLESKETLKIEVPNCCSLQQLKDTISHVISSSSSSSLHLSLNRKDEIHASSPDDSIQSLGIASGDLVFYTLNPTAFSPETQTLLHKPTPQEPFNSCDVPSIQHSSEILMVDAPSIPEAEKIPSLESSTAETVDMADGSGGEEVVVRKTNSEASFVKRVLKEANGNDVTDLKLLVLVVHAVILESGFVRAEKISPLGVGSSHILDEWPSASASSISLRVSLDKRKFAKPLKLMLENFESKDNFDDDAVVDQQSEIFELWKMVKDRLALPLLIDLCDKAGLDPPPCFMRLPTELKIMILERLPGVDVARVACLCTELQYLSGNNDLWRKKFEEEFGVAGCRAVFFKEFFALHWETRKRSMRPVFPIQMRQRPYALFPARRDRNPFGIPSIVGGDYDRLPGFGLQFPTYSPRRTFLPPCHRGGFHH 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03822 429 ProSiteProfiles F-box domain profile. 288 334 IPR001810 GO:0005515
Aip09g03822 429 Gene3D - 292 373 - -
Aip09g03822 429 PANTHER F-BOX PROTEIN SKIP22 1 222 - -
Aip09g03822 429 Pfam F-box domain 291 333 IPR001810 GO:0005515
Aip09g03822 429 PANTHER F-BOX PROTEIN SKIP22 1 222 - -
Aip09g03822 429 PANTHER F-BOX PROTEIN SKIP22 219 428 - -
Aip09g03822 429 Gene3D - 222 291 - -
Aip09g03822 429 SUPERFAMILY F-box domain 284 342 IPR036047 GO:0005515
Aip09g03822 429 Gene3D - 1 77 - -
Aip09g03822 429 PANTHER F-BOX PROTEIN SKIP22 219 428 - -
Aip09g03822 429 SMART fbox_2 294 334 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03822 K10293 - gmx:100796338 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03822 09 144827370 144828791 Aip09g03822 09 144827370 144828791 ECH